FFCP PHASE1:Hg19::chr16:3041330..3041336,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:3041330..3041336,+ | |||
|description=CAGE_peak_at_chr16:3041330..3041336,+ | |description=CAGE_peak_at_chr16:3041330..3041336,+ | ||
|id=chr16:3041330..3041336,+ | |id=chr16:3041330..3041336,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.04e-14!254;CL:0002076!1.09e-13!43;CL:0002336!7.98e-10!1;CL:0002261!7.98e-10!1;CL:0002170!7.98e-10!1;CL:0000313!1.12e-09!1;CL:0000223!1.28e-09!59;CL:0002251!1.76e-09!21;CL:0002202!1.61e-08!9;CL:0002632!1.61e-08!9;CL:0000082!5.01e-07!19 | |ontology_enrichment_celltype=CL:0000066!2.04e-14!254;CL:0002076!1.09e-13!43;CL:0002336!7.98e-10!1;CL:0002261!7.98e-10!1;CL:0002170!7.98e-10!1;CL:0000313!1.12e-09!1;CL:0000223!1.28e-09!59;CL:0002251!1.76e-09!21;CL:0002202!1.61e-08!9;CL:0002632!1.61e-08!9;CL:0000082!5.01e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002336;2.41e-50;1!CL:0002261;2.41e-50;1!CL:0002170;2.41e-50;1!CL:0000240;1.32e-09;6!CL:0000311;1.32e-09;6!CL:0000079;1.32e-09;6!CL:0000237;1.32e-09;6 | |ontology_enrichment_celltype_v019=CL:0002336;2.41e-50;1!CL:0002261;2.41e-50;1!CL:0002170;2.41e-50;1!CL:0000240;1.32e-09;6!CL:0000311;1.32e-09;6!CL:0000079;1.32e-09;6!CL:0000237;1.32e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002336,1.46e-50,1;CL:0002261,1.46e-50,1;CL:0002170,1.46e-50,1;CL:0000240,1.22e-09,6;CL:0000311,1.22e-09,6;CL:0000079,1.22e-09,6;CL:0000237,1.22e-09,6;CL:0000036,1.22e-09,6;CL:0000357,1.22e-09,6;CL:0000114,1.22e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000357;1.32e-09;6!CL:0000114;1.32e-09;6 | |ontology_enrichment_development_v019=CL:0000357;1.32e-09;6!CL:0000114;1.32e-09;6 | ||
|ontology_enrichment_disease=DOID:5093!1.20e-18!4;DOID:1612!1.20e-18!4;DOID:305!2.93e-14!106;DOID:0050687!7.19e-10!143;DOID:2152!1.12e-09!1;DOID:1749!2.71e-09!14;DOID:299!4.73e-08!25 | |ontology_enrichment_disease=DOID:5093!1.20e-18!4;DOID:1612!1.20e-18!4;DOID:305!2.93e-14!106;DOID:0050687!7.19e-10!143;DOID:2152!1.12e-09!1;DOID:1749!2.71e-09!14;DOID:299!4.73e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.00e-13;4!DOID:1612;1.00e-13;4!DOID:299;5.27e-09;25 | |ontology_enrichment_disease_v019=DOID:5093;1.00e-13;4!DOID:1612;1.00e-13;4!DOID:299;5.27e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.00e-13,4;DOID:1612,1.00e-13,4;DOID:299,5.49e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0005153!9.57e-10!37;UBERON:0000997!1.03e-09!1;UBERON:0005056!1.03e-09!1;UBERON:0004911!1.12e-09!1;UBERON:0007029!1.32e-09!1;UBERON:0000915!8.17e-09!52;UBERON:0000310!8.95e-08!10;UBERON:0003729!1.88e-07!5;UBERON:0001443!4.15e-07!11;UBERON:0004807!4.33e-07!28;UBERON:0004802!5.01e-07!19;UBERON:0000115!5.01e-07!19;UBERON:0005157!7.40e-07!51 | |ontology_enrichment_uberon=UBERON:0005153!9.57e-10!37;UBERON:0000997!1.03e-09!1;UBERON:0005056!1.03e-09!1;UBERON:0004911!1.12e-09!1;UBERON:0007029!1.32e-09!1;UBERON:0000915!8.17e-09!52;UBERON:0000310!8.95e-08!10;UBERON:0003729!1.88e-07!5;UBERON:0001443!4.15e-07!11;UBERON:0004807!4.33e-07!28;UBERON:0004802!5.01e-07!19;UBERON:0000115!5.01e-07!19;UBERON:0005157!7.40e-07!51 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;6.58e-50;1!UBERON:0005056;6.58e-50;1!UBERON:0004176;6.58e-50;1 | |ontology_enrichment_uberon_v019=UBERON:0000997;6.58e-50;1!UBERON:0005056;6.58e-50;1!UBERON:0004176;6.58e-50;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.58e-50,1;UBERON:0005056,6.58e-50,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.502644862058154,2.59247646443883,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07791637155815,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.502644862058154,2.59247646443883,0,0,0,0,0,0,0,0,2.37061319387782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07791637155815,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:3041330..3041336,+ | |short_description=p@chr16:3041330..3041336,+ | ||
}} | }} |
Latest revision as of 08:10, 25 July 2015
Short description: | p@chr16:3041330..3041336, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3041330..3041336, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 1.46e-50 | 1 |
endothelial cell of viscerocranial mucosa | 1.46e-50 | 1 |
keratinized cell of the oral mucosa | 1.46e-50 | 1 |
stratified squamous epithelial cell | 1.22e-09 | 6 |
keratin accumulating cell | 1.22e-09 | 6 |
stratified epithelial cell | 1.22e-09 | 6 |
keratinizing barrier epithelial cell | 1.22e-09 | 6 |
epithelial fate stem cell | 1.22e-09 | 6 |
stratified epithelial stem cell | 1.22e-09 | 6 |
surface ectodermal cell | 1.22e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.58e-50 | 1 |
external female genitalia | 6.58e-50 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.00e-13 | 4 |
breast cancer | 1.00e-13 | 4 |
adenocarcinoma | 5.49e-09 | 25 |