FFCP PHASE1:Hg19::chr16:3005195..3005202,-: Difference between revisions
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|id=chr16:3005195..3005202,-
|short_description=p@chr16:3005195..3005202,-
|description=CAGE_peak_at_chr16:3005195..3005202,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:3005195..3005202,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr16:3005195..3005202,- | |||
|id=chr16:3005195..3005202,- | |||
|ontology_enrichment_celltype=CL:0000242!1.89e-37!2;CL:0000039!1.33e-23!7;CL:0000586!1.33e-23!7;CL:0000312!1.21e-15!5;CL:0000240!3.34e-13!6;CL:0000311!3.34e-13!6;CL:0000079!3.34e-13!6;CL:0000237!3.34e-13!6;CL:0000036!3.34e-13!6;CL:0000357!3.34e-13!6;CL:0000114!3.34e-13!6;CL:0002535!2.07e-10!2;CL:0000362!3.85e-10!8;CL:0002178!3.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.55e-98;2!CL:0000242;1.55e-98;2!CL:0000312;2.71e-40;5!CL:0000240;8.35e-34;6!CL:0000311;8.35e-34;6!CL:0000079;8.35e-34;6!CL:0000237;8.35e-34;6!CL:0000362;5.74e-23;9!CL:0002159;3.41e-15;14!CL:0000095;1.72e-11;17!CL:0002319;2.14e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.55e-98,2;CL:0000312,2.71e-40,5;CL:0000240,8.35e-34,6;CL:0000311,8.35e-34,6;CL:0000079,8.35e-34,6;CL:0000237,8.35e-34,6;CL:0000036,8.35e-34,6;CL:0000357,8.35e-34,6;CL:0000114,8.35e-34,6;CL:0000362,5.74e-23,9;CL:0002159,3.41e-15,14;CL:0000095,1.72e-11,17;CL:0000123,1.72e-11,17;CL:0002319,2.14e-08,25;CL:0002077,7.16e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;8.35e-34;6!CL:0000114;8.35e-34;6 | |||
|ontology_enrichment_disease=DOID:0050619!1.08e-19!1;DOID:1357!1.08e-19!1;DOID:305!1.94e-10!106;DOID:3493!3.27e-10!2;DOID:3095!5.93e-08!22;DOID:2994!5.93e-08!22;DOID:0050687!1.35e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.42e-50;1!DOID:1357;2.42e-50;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.42e-50,1;DOID:1357,2.42e-50,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.50e-21!8;UBERON:0001764!1.08e-19!1;UBERON:0001825!1.08e-19!1;UBERON:0002372!5.62e-19!1;UBERON:0001961!5.62e-19!1;UBERON:0001744!5.62e-19!1;UBERON:0001735!5.62e-19!1;UBERON:0003135!2.74e-15!11;UBERON:0006955!2.07e-10!2;UBERON:0004801!2.07e-10!2;UBERON:0003127!2.27e-10!2;UBERON:0000991!2.64e-08!21;UBERON:0009196!2.64e-08!21;UBERON:0009117!2.64e-08!21;UBERON:0005564!2.64e-08!21;UBERON:0004176!5.93e-08!22;UBERON:0003101!5.93e-08!22;UBERON:0000079!5.93e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.42e-50;1!UBERON:0001825;2.42e-50;1!UBERON:0001003;2.94e-14;15!UBERON:0007376;2.94e-14;15!UBERON:0010371;3.57e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.42e-50,1;UBERON:0001825,2.42e-50,1;UBERON:0001003,2.94e-14,15;UBERON:0007376,2.94e-14,15;UBERON:0007383,2.94e-14,15 | |||
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|short_description=p@chr16:3005195..3005202,- | |||
}} | }} |
Latest revision as of 08:02, 25 July 2015
Short description: | p@chr16:3005195..3005202, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3005195..3005202, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.55e-98 | 2 |
keratinocyte | 2.71e-40 | 5 |
stratified squamous epithelial cell | 8.35e-34 | 6 |
keratin accumulating cell | 8.35e-34 | 6 |
stratified epithelial cell | 8.35e-34 | 6 |
keratinizing barrier epithelial cell | 8.35e-34 | 6 |
epithelial fate stem cell | 8.35e-34 | 6 |
stratified epithelial stem cell | 8.35e-34 | 6 |
surface ectodermal cell | 8.35e-34 | 6 |
epidermal cell | 5.74e-23 | 9 |
general ecto-epithelial cell | 3.41e-15 | 14 |
neuron associated cell | 1.72e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.72e-11 | 17 |
neural cell | 2.14e-08 | 25 |
ecto-epithelial cell | 7.16e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.42e-50 | 1 |
paranasal sinus | 2.42e-50 | 1 |
skin epidermis | 2.94e-14 | 15 |
outer epithelium | 2.94e-14 | 15 |
enveloping layer of ectoderm | 2.94e-14 | 15 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.42e-50 | 1 |
maxillary sinus cancer | 2.42e-50 | 1 |