FFCP PHASE1:Hg19::chr16:28995993..28996015,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-374bp_to_CU678918_5end | |||
|cluster_id=chr16:28995993..28996015,- | |||
|coexpression_cluster_id=C3551 | |||
|description=CAGE_peak_1_at_CU678918_5end | |||
|id=chr16:28995993..28996015,- | |||
|ontology_enrichment_celltype=CL:0002032!1.33e-38!165;CL:0000837!1.33e-38!165;CL:0000037!1.19e-37!172;CL:0000566!1.19e-37!172;CL:0000763!4.52e-36!112;CL:0000049!4.52e-36!112;CL:0000988!1.46e-34!182;CL:0000766!2.12e-31!76;CL:0000839!3.43e-31!70;CL:0002031!5.19e-31!124;CL:0000557!1.34e-30!71;CL:0000738!1.12e-29!140;CL:0002057!9.65e-27!42;CL:0002087!4.84e-26!119;CL:0002194!9.14e-25!63;CL:0000576!9.14e-25!63;CL:0000040!9.14e-25!63;CL:0000559!9.14e-25!63;CL:0000860!1.98e-24!45;CL:0002009!1.01e-23!65;CL:0002274!2.09e-12!5;CL:0000457!2.09e-12!5;CL:0002191!2.09e-12!5;CL:0000097!2.09e-12!5;CL:0000831!2.09e-12!5;CL:0002028!2.09e-12!5;CL:0000134!4.22e-10!358;CL:0002320!1.37e-09!365;CL:0000219!3.01e-09!390;CL:0000791!2.90e-07!18;CL:0000789!2.90e-07!18;CL:0002420!2.90e-07!18;CL:0002419!2.90e-07!18;CL:0000790!2.90e-07!18;CL:0000623!4.38e-07!3;CL:0000825!4.38e-07!3;CL:0000084!5.20e-07!25;CL:0000827!5.20e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.04e-37;5!CL:0000163;9.50e-21;9!CL:0000766;3.77e-12;69!CL:0000763;1.10e-11;100!CL:0000576;1.48e-09;48!CL:0000860;7.11e-09;33!CL:0002057;7.11e-09;33!CL:0000473;3.79e-07;39!CL:0000234;3.79e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.98e-37,5;CL:0002028,1.98e-37,5;CL:0000763,7.20e-31,108;CL:0000049,7.20e-31,108;CL:0000839,2.84e-21,66;CL:0000557,6.42e-21,67;CL:0000163,9.35e-21,9;CL:0002032,2.04e-19,161;CL:0000837,2.04e-19,161;CL:0000766,2.73e-19,72;CL:0000037,1.94e-18,168;CL:0000988,2.71e-17,177;CL:0002031,1.68e-10,120;CL:0002194,4.15e-10,59;CL:0000576,4.15e-10,59;CL:0000040,4.15e-10,59;CL:0000559,4.15e-10,59;CL:0002009,9.93e-10,61;CL:0000738,6.06e-09,136;CL:0000860,2.36e-07,42;CL:0002057,2.36e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000049;1.72e-10;108 | |||
|ontology_enrichment_disease=DOID:1240!1.42e-13!39;DOID:8692!7.07e-13!31;DOID:2531!3.19e-09!51;DOID:0060083!3.19e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.86e-25;31!DOID:1240;2.06e-13;39!DOID:9119;2.20e-08;1!DOID:2531;6.89e-08;51!DOID:0060083;6.89e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.53e-26,31;DOID:1240,1.56e-20,39;DOID:2531,3.01e-15,51;DOID:0060083,3.01e-15,51;DOID:9119,2.46e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.34e-29!102;UBERON:0003061!8.34e-29!102;UBERON:0002371!6.21e-26!80;UBERON:0002193!4.44e-25!112;UBERON:0001474!2.26e-23!86;UBERON:0002405!3.40e-20!115;UBERON:0004765!2.52e-18!101;UBERON:0001434!2.52e-18!101;UBERON:0002384!2.13e-09!375;UBERON:0002204!1.90e-08!167;UBERON:0003081!6.72e-08!216;UBERON:0002370!1.14e-07!4;UBERON:0005058!1.14e-07!4;UBERON:0009113!1.14e-07!4;UBERON:0003295!1.14e-07!4;UBERON:0005562!1.14e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001264;7.10e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.87e-18,76;UBERON:0001474,1.28e-16,82;UBERON:0002390,1.90e-15,98;UBERON:0003061,1.90e-15,98;UBERON:0004765,6.59e-15,90;UBERON:0002405,2.43e-14,93;UBERON:0002193,9.51e-14,108;UBERON:0001434,3.79e-13,100;UBERON:0001264,7.63e-07,10;UBERON:0002204,8.92e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0,0,0,0.726991193897824,0.755751887377619,0.485168122375632,0.929716147622738,0.411167888021826,1.23882548358041,0.28769239232215,0,0,1.72372840368309,0,0,1.50593871634084,1.09162460023138,0.674170453335254,1.22433556948361,0.962787081228281,0.639337125799041,0.329851300186716,0.199463657621632,0,1.45104619314292,0.56738522469114,0.622822248995575,0.75374599577023,1.0429658368404,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0,0.167186495390678,0.651844533267181,0,0,0.222820913770347,0,0,0,0.25618263945135,0.260118695119756,0.986627427622057,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0.383959833463255,0,0.710331756132051,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,3.94130590316755,4.31437326664808,7.67114027500857,4.61183850934277,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0.591092280605782,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.635020748171649,0,0,0,0,2.50634477090067,0,1.4452926759333,2.01799707191048,1.70338495076131,0,1.84344458585075,2.23676107892416,1.66849141711908,0.586164286206121,7.51696669517154,0,0.811367035427949,1.33228787199128,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,1.65495977937749,1.2557316736289,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0,0,0,0.213452994739353,0,0,0,0,0,0.49701014226173,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,2.13440553948281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@CU678918 | |||
}} |
Latest revision as of 07:47, 25 July 2015
Short description: | p1@CU678918 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU678918_5end |
Coexpression cluster: | C3551_acute_Mast_biphenotypic_leukemia_embryonic_small_CD14 |
Association with transcript: | -374bp_to_CU678918_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.98e-37 | 5 |
basophil mast progenitor cell | 1.98e-37 | 5 |
myeloid cell | 7.20e-31 | 108 |
common myeloid progenitor | 7.20e-31 | 108 |
myeloid lineage restricted progenitor cell | 2.84e-21 | 66 |
granulocyte monocyte progenitor cell | 6.42e-21 | 67 |
endocrine cell | 9.35e-21 | 9 |
hematopoietic oligopotent progenitor cell | 2.04e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-19 | 161 |
myeloid leukocyte | 2.73e-19 | 72 |
hematopoietic stem cell | 1.94e-18 | 168 |
hematopoietic cell | 2.71e-17 | 177 |
hematopoietic lineage restricted progenitor cell | 1.68e-10 | 120 |
monopoietic cell | 4.15e-10 | 59 |
monocyte | 4.15e-10 | 59 |
monoblast | 4.15e-10 | 59 |
promonocyte | 4.15e-10 | 59 |
macrophage dendritic cell progenitor | 9.93e-10 | 61 |
leukocyte | 6.06e-09 | 136 |
classical monocyte | 2.36e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.36e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.87e-18 | 76 |
bone element | 1.28e-16 | 82 |
hematopoietic system | 1.90e-15 | 98 |
blood island | 1.90e-15 | 98 |
skeletal element | 6.59e-15 | 90 |
immune system | 2.43e-14 | 93 |
hemolymphoid system | 9.51e-14 | 108 |
skeletal system | 3.79e-13 | 100 |
pancreas | 7.63e-07 | 10 |
musculoskeletal system | 8.92e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.53e-26 | 31 |
leukemia | 1.56e-20 | 39 |
hematologic cancer | 3.01e-15 | 51 |
immune system cancer | 3.01e-15 | 51 |
acute myeloid leukemia | 2.46e-08 | 1 |