FFCP PHASE1:Hg19::chr16:28995941..28995949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-322bp_to_CU678918_5end | |association_with_transcript=-322bp_to_CU678918_5end | ||
|cluster_id=chr16:28995941..28995949,- | |||
|coexpression_cluster_id=C728 | |||
|description=CAGE_peak_5_at_CU678918_5end | |description=CAGE_peak_5_at_CU678918_5end | ||
|id=chr16:28995941..28995949,- | |id=chr16:28995941..28995949,- | ||
|ontology_enrichment_celltype=CL:0002057!5.09e-75!42;CL:0000860!1.82e-69!45;CL:0000766!1.04e-68!76;CL:0000839!1.00e-67!70;CL:0000557!1.20e-66!71;CL:0002194!3.24e-56!63;CL:0000576!3.24e-56!63;CL:0000040!3.24e-56!63;CL:0000559!3.24e-56!63;CL:0002009!3.04e-54!65;CL:0000738!1.35e-51!140;CL:0000763!1.76e-48!112;CL:0000049!1.76e-48!112;CL:0002031!4.37e-47!124;CL:0000037!6.73e-44!172;CL:0000566!6.73e-44!172;CL:0002087!1.35e-41!119;CL:0000988!7.11e-41!182;CL:0002032!2.81e-40!165;CL:0000837!2.81e-40!165;CL:0002274!2.04e-18!5;CL:0000457!2.04e-18!5;CL:0002191!2.04e-18!5;CL:0000097!2.04e-18!5;CL:0000831!2.04e-18!5;CL:0002028!2.04e-18!5;CL:0000134!3.45e-15!358;CL:0002320!1.12e-14!365;CL:0000219!7.13e-13!390;CL:0000034!8.95e-11!444;CL:0000048!1.02e-10!430;CL:0000623!2.04e-10!3;CL:0000825!2.04e-10!3;CL:0000723!2.07e-10!436;CL:0000163!4.54e-10!9 | |ontology_enrichment_celltype=CL:0002057!5.09e-75!42;CL:0000860!1.82e-69!45;CL:0000766!1.04e-68!76;CL:0000839!1.00e-67!70;CL:0000557!1.20e-66!71;CL:0002194!3.24e-56!63;CL:0000576!3.24e-56!63;CL:0000040!3.24e-56!63;CL:0000559!3.24e-56!63;CL:0002009!3.04e-54!65;CL:0000738!1.35e-51!140;CL:0000763!1.76e-48!112;CL:0000049!1.76e-48!112;CL:0002031!4.37e-47!124;CL:0000037!6.73e-44!172;CL:0000566!6.73e-44!172;CL:0002087!1.35e-41!119;CL:0000988!7.11e-41!182;CL:0002032!2.81e-40!165;CL:0000837!2.81e-40!165;CL:0002274!2.04e-18!5;CL:0000457!2.04e-18!5;CL:0002191!2.04e-18!5;CL:0000097!2.04e-18!5;CL:0000831!2.04e-18!5;CL:0002028!2.04e-18!5;CL:0000134!3.45e-15!358;CL:0002320!1.12e-14!365;CL:0000219!7.13e-13!390;CL:0000034!8.95e-11!444;CL:0000048!1.02e-10!430;CL:0000623!2.04e-10!3;CL:0000825!2.04e-10!3;CL:0000723!2.07e-10!436;CL:0000163!4.54e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.31e-56;33!CL:0002057;8.31e-56;33!CL:0000473;9.60e-40;39!CL:0000234;9.60e-40;39!CL:0000576;1.46e-38;48!CL:0000766;8.71e-29;69!CL:0000097;9.51e-16;5!CL:0002393;3.42e-13;6!CL:0002397;3.42e-13;6!CL:0000763;2.26e-09;100!CL:0000738;4.87e-09;136!CL:0000163;5.51e-09;9!CL:0002087;5.52e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.76e-68,42;CL:0002057,2.76e-68,42;CL:0000473,2.23e-59,48;CL:0000234,2.23e-59,48;CL:0000839,8.11e-57,66;CL:0000557,6.19e-56,67;CL:0000766,6.99e-52,72;CL:0002194,6.71e-47,59;CL:0000576,6.71e-47,59;CL:0000040,6.71e-47,59;CL:0000559,6.71e-47,59;CL:0002009,2.74e-45,61;CL:0000763,1.17e-33,108;CL:0000049,1.17e-33,108;CL:0002031,5.48e-30,120;CL:0000738,4.33e-26,136;CL:0002087,9.44e-23,115;CL:0002032,1.56e-21,161;CL:0000837,1.56e-21,161;CL:0000037,1.69e-20,168;CL:0000988,2.76e-19,177;CL:0000097,7.41e-16,5;CL:0002028,7.41e-16,5;CL:0000163,4.81e-09,9;CL:0002393,6.68e-09,9;CL:0002397,6.68e-09,9;CL:0000134,7.39e-08,354;CL:0002320,1.24e-07,361;CL:0000219,7.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-47;42!CL:0000049;1.72e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.77e-58!80;UBERON:0002390!1.11e-56!102;UBERON:0003061!1.11e-56!102;UBERON:0001474!1.84e-53!86;UBERON:0002193!9.90e-51!112;UBERON:0004765!3.73e-44!101;UBERON:0001434!3.73e-44!101;UBERON:0002405!6.04e-42!115;UBERON:0002204!5.59e-23!167;UBERON:0003081!2.29e-21!216;UBERON:0002384!5.59e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.10e-49,76;UBERON:0001474,3.07e-45,82;UBERON:0002390,4.10e-41,98;UBERON:0003061,4.10e-41,98;UBERON:0004765,5.66e-41,90;UBERON:0002405,1.46e-39,93;UBERON:0002193,4.91e-37,108;UBERON:0001434,1.37e-36,100;UBERON:0002204,1.22e-20,167;UBERON:0003081,3.53e-18,203;UBERON:0000926,1.91e-10,315;UBERON:0004120,1.91e-10,315;UBERON:0006603,1.91e-10,315;UBERON:0002384,2.51e-07,371 | |||
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| ||
|short_description=p5@CU678918 | |short_description=p5@CU678918 | ||
}} | }} |
Latest revision as of 07:47, 25 July 2015
Short description: | p5@CU678918 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CU678918_5end |
Coexpression cluster: | C728_Mast_CD14_Basophils_chorionic_immature_Monocytederived_acute |
Association with transcript: | -322bp_to_CU678918_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.76e-68 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.76e-68 | 42 |
defensive cell | 2.23e-59 | 48 |
phagocyte | 2.23e-59 | 48 |
myeloid lineage restricted progenitor cell | 8.11e-57 | 66 |
granulocyte monocyte progenitor cell | 6.19e-56 | 67 |
myeloid leukocyte | 6.99e-52 | 72 |
monopoietic cell | 6.71e-47 | 59 |
monocyte | 6.71e-47 | 59 |
monoblast | 6.71e-47 | 59 |
promonocyte | 6.71e-47 | 59 |
macrophage dendritic cell progenitor | 2.74e-45 | 61 |
myeloid cell | 1.17e-33 | 108 |
common myeloid progenitor | 1.17e-33 | 108 |
hematopoietic lineage restricted progenitor cell | 5.48e-30 | 120 |
leukocyte | 4.33e-26 | 136 |
nongranular leukocyte | 9.44e-23 | 115 |
hematopoietic oligopotent progenitor cell | 1.56e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-21 | 161 |
hematopoietic stem cell | 1.69e-20 | 168 |
hematopoietic cell | 2.76e-19 | 177 |
mast cell | 7.41e-16 | 5 |
basophil mast progenitor cell | 7.41e-16 | 5 |
endocrine cell | 4.81e-09 | 9 |
intermediate monocyte | 6.68e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.68e-09 | 9 |
mesenchymal cell | 7.39e-08 | 354 |
connective tissue cell | 1.24e-07 | 361 |
motile cell | 7.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.10e-49 | 76 |
bone element | 3.07e-45 | 82 |
hematopoietic system | 4.10e-41 | 98 |
blood island | 4.10e-41 | 98 |
skeletal element | 5.66e-41 | 90 |
immune system | 1.46e-39 | 93 |
hemolymphoid system | 4.91e-37 | 108 |
skeletal system | 1.37e-36 | 100 |
musculoskeletal system | 1.22e-20 | 167 |
lateral plate mesoderm | 3.53e-18 | 203 |
mesoderm | 1.91e-10 | 315 |
mesoderm-derived structure | 1.91e-10 | 315 |
presumptive mesoderm | 1.91e-10 | 315 |
connective tissue | 2.51e-07 | 371 |