FFCP PHASE1:Hg19::chr16:2657680..2657706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:2657680..2657706,- | |||
|description=CAGE_peak_at_chr16:2657680..2657706,- | |description=CAGE_peak_at_chr16:2657680..2657706,- | ||
|id=chr16:2657680..2657706,- | |id=chr16:2657680..2657706,- | ||
|ontology_enrichment_celltype=CL:0000945!7.77e-19!24;CL:0000826!7.77e-19!24;CL:0000542!1.67e-11!53;CL:0000051!1.67e-11!53;CL:0000817!3.91e-11!3;CL:0000838!4.16e-10!52;CL:0000738!2.77e-09!140;CL:0001014!1.95e-08!2;CL:0001016!1.95e-08!2;CL:0002031!3.92e-08!124;CL:0000037!5.19e-08!172;CL:0000566!5.19e-08!172;CL:0000785!6.87e-08!2;CL:0000955!6.87e-08!2;CL:0000818!6.87e-08!2;CL:0000954!6.87e-08!2;CL:0000816!6.87e-08!2;CL:0002087!1.07e-07!119;CL:0000988!3.11e-07!182;CL:0002032!5.38e-07!165;CL:0000837!5.38e-07!165 | |ontology_enrichment_celltype=CL:0000945!7.77e-19!24;CL:0000826!7.77e-19!24;CL:0000542!1.67e-11!53;CL:0000051!1.67e-11!53;CL:0000817!3.91e-11!3;CL:0000838!4.16e-10!52;CL:0000738!2.77e-09!140;CL:0001014!1.95e-08!2;CL:0001016!1.95e-08!2;CL:0002031!3.92e-08!124;CL:0000037!5.19e-08!172;CL:0000566!5.19e-08!172;CL:0000785!6.87e-08!2;CL:0000955!6.87e-08!2;CL:0000818!6.87e-08!2;CL:0000954!6.87e-08!2;CL:0000816!6.87e-08!2;CL:0002087!1.07e-07!119;CL:0000988!3.11e-07!182;CL:0002032!5.38e-07!165;CL:0000837!5.38e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000785;3.15e-29;1!CL:0000819;3.15e-29;1!CL:0000945;3.02e-19;24!CL:0001014;1.43e-15;2!CL:0001016;1.43e-15;2!CL:0000542;2.67e-10;53!CL:0000236;1.24e-09;13!CL:0000453;5.23e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.37e-29,1;CL:0000945,2.95e-19,24;CL:0000826,2.95e-19,24;CL:0001014,1.78e-15,2;CL:0001016,1.78e-15,2;CL:0000785,2.05e-15,2;CL:0000955,2.05e-15,2;CL:0000818,2.05e-15,2;CL:0000954,2.05e-15,2;CL:0000816,2.05e-15,2;CL:0000838,6.52e-14,52;CL:0000542,1.17e-13,53;CL:0000051,1.17e-13,53;CL:0000817,9.90e-11,3;CL:0000236,4.95e-09,14;CL:0002031,1.25e-08,120;CL:0000738,1.23e-07,136;CL:0000453,5.70e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000954;2.37e-15;2!CL:0000051;2.67e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;3.15e-29;1!DOID:8675;3.15e-29;1!DOID:0060058;2.58e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.37e-29,1;DOID:8675,2.37e-29,1;DOID:0060058,2.24e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.77e-10!3;UBERON:0004854!1.77e-10!3;UBERON:0009034!1.77e-10!3;UBERON:0002095!1.77e-10!3;UBERON:0004782!1.77e-10!3;UBERON:0003281!1.77e-10!3;UBERON:0009664!1.77e-10!3;UBERON:0002296!1.77e-10!3;UBERON:0005602!1.77e-10!3;UBERON:0001179!1.77e-10!3;UBERON:0006293!1.77e-10!3;UBERON:0000945!4.16e-10!8;UBERON:0010039!4.16e-10!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.78e-11;3!UBERON:0004177;5.23e-07;5!UBERON:0005057;5.23e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.73e-11,3;UBERON:0004854,6.73e-11,3;UBERON:0009034,6.73e-11,3;UBERON:0002095,6.73e-11,3;UBERON:0004782,6.73e-11,3;UBERON:0003281,6.73e-11,3;UBERON:0009664,6.73e-11,3;UBERON:0002296,6.73e-11,3;UBERON:0005602,6.73e-11,3;UBERON:0001179,6.73e-11,3;UBERON:0006293,6.73e-11,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.57470412614962,0.550975469195755,0,0,0.309632246632152,0,0,0,0.154934401160603,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0.612167784741805,0.962787081228281,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.743212700502875,0.577076851905779,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70786572014353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45963831372533,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,2.99823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr16:2657680..2657706,- | |short_description=p@chr16:2657680..2657706,- | ||
}} | }} |
Latest revision as of 07:28, 25 July 2015
Short description: | p@chr16:2657680..2657706, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2657680..2657706, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.37e-29 | 1 |
lymphocyte of B lineage | 2.95e-19 | 24 |
pro-B cell | 2.95e-19 | 24 |
CD1a-positive Langerhans cell | 1.78e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.78e-15 | 2 |
mature B cell | 2.05e-15 | 2 |
pre-B-II cell | 2.05e-15 | 2 |
transitional stage B cell | 2.05e-15 | 2 |
small pre-B-II cell | 2.05e-15 | 2 |
immature B cell | 2.05e-15 | 2 |
lymphoid lineage restricted progenitor cell | 6.52e-14 | 52 |
lymphocyte | 1.17e-13 | 53 |
common lymphoid progenitor | 1.17e-13 | 53 |
precursor B cell | 9.90e-11 | 3 |
B cell | 4.95e-09 | 14 |
hematopoietic lineage restricted progenitor cell | 1.25e-08 | 120 |
leukocyte | 1.23e-07 | 136 |
Langerhans cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.73e-11 | 3 |
gastrointestinal system mesentery | 6.73e-11 | 3 |
stomach region | 6.73e-11 | 3 |
mesentery | 6.73e-11 | 3 |
gastrointestinal system serosa | 6.73e-11 | 3 |
mesentery of stomach | 6.73e-11 | 3 |
gut mesentery | 6.73e-11 | 3 |
dorsal mesentery | 6.73e-11 | 3 |
dorsal mesogastrium | 6.73e-11 | 3 |
peritoneal cavity | 6.73e-11 | 3 |
spleen primordium | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.37e-29 | 1 |
lymphosarcoma | 2.37e-29 | 1 |
lymphoma | 2.24e-12 | 10 |