FFCP PHASE1:Hg19::chr16:21652353..21652374,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:21652353..21652374,- | |||
|coexpression_cluster_id=C469 | |||
|description=CAGE_peak_at_chr16:21652353..21652374,- | |||
|id=chr16:21652353..21652374,- | |||
|ontology_enrichment_celltype=CL:0002009!1.31e-102!65;CL:0002194!3.60e-98!63;CL:0000576!3.60e-98!63;CL:0000040!3.60e-98!63;CL:0000559!3.60e-98!63;CL:0000557!8.22e-93!71;CL:0000766!5.77e-90!76;CL:0000839!4.75e-87!70;CL:0002057!9.49e-85!42;CL:0000860!2.56e-78!45;CL:0000763!3.10e-61!112;CL:0000049!3.10e-61!112;CL:0000738!7.63e-50!140;CL:0002087!1.19e-49!119;CL:0002031!3.78e-47!124;CL:0000037!9.81e-38!172;CL:0000566!9.81e-38!172;CL:0002032!8.62e-37!165;CL:0000837!8.62e-37!165;CL:0000988!8.01e-35!182;CL:0000134!2.07e-12!358;CL:0002393!6.04e-12!9;CL:0002397!6.04e-12!9;CL:0002320!6.96e-12!365;CL:0000840!8.77e-11!5;CL:0001029!8.77e-11!5;CL:0000219!4.87e-10!390;CL:0000235!1.71e-09!10;CL:0000775!7.95e-09!3;CL:0000048!7.25e-08!430;CL:0000723!1.46e-07!436;CL:0002619!1.60e-07!3;CL:0000034!3.60e-07!444;CL:0000990!4.86e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.86e-81;39!CL:0000234;3.86e-81;39!CL:0000860;2.71e-73;33!CL:0002057;2.71e-73;33!CL:0000576;1.97e-35;48!CL:0000766;7.54e-31;69!CL:0000235;3.31e-25;6!CL:0000763;1.89e-17;100!CL:0002087;2.55e-10;104!CL:0000738;3.98e-10;136!CL:0000775;3.62e-09;3!CL:0000219;1.30e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.42e-91,48;CL:0000234,4.42e-91,48;CL:0002194,2.99e-83,59;CL:0000576,2.99e-83,59;CL:0000040,2.99e-83,59;CL:0000559,2.99e-83,59;CL:0002009,2.16e-80,61;CL:0000766,1.19e-77,72;CL:0000839,5.44e-74,66;CL:0000557,8.00e-73,67;CL:0000860,4.05e-69,42;CL:0002057,4.05e-69,42;CL:0000763,3.53e-50,108;CL:0000049,3.53e-50,108;CL:0002087,1.99e-40,115;CL:0000738,8.93e-39,136;CL:0002031,1.58e-38,120;CL:0002032,6.46e-32,161;CL:0000837,6.46e-32,161;CL:0000037,2.34e-30,168;CL:0000988,1.56e-28,177;CL:0000235,2.34e-25,6;CL:0000134,2.23e-11,354;CL:0002320,4.85e-11,361;CL:0000219,7.44e-10,386;CL:0000775,3.08e-09,3;CL:0000048,2.12e-08,427;CL:0000723,3.36e-08,433;CL:0000034,6.12e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.85e-52;42!CL:0000049;5.57e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.75e-81!80;UBERON:0002390!3.67e-79!102;UBERON:0003061!3.67e-79!102;UBERON:0001474!3.12e-74!86;UBERON:0002193!9.72e-71!112;UBERON:0004765!4.00e-61!101;UBERON:0001434!4.00e-61!101;UBERON:0002405!2.38e-56!115;UBERON:0003081!3.97e-33!216;UBERON:0002204!2.50e-31!167;UBERON:0002384!3.62e-11!375;UBERON:0000926!1.40e-09!448;UBERON:0004120!1.40e-09!448;UBERON:0006603!1.40e-09!448;UBERON:0000062!3.90e-07!511;UBERON:0000923!9.11e-07!604;UBERON:0005291!9.11e-07!604;UBERON:0006598!9.11e-07!604;UBERON:0002532!9.11e-07!604;UBERON:0002050!9.98e-07!605;UBERON:0005423!9.98e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.11e-63,76;UBERON:0001474,1.11e-58,82;UBERON:0002390,1.78e-55,98;UBERON:0003061,1.78e-55,98;UBERON:0004765,4.81e-53,90;UBERON:0002405,3.55e-51,93;UBERON:0002193,7.08e-50,108;UBERON:0001434,3.00e-47,100;UBERON:0002204,3.47e-26,167;UBERON:0003081,5.29e-24,203;UBERON:0000926,2.04e-13,315;UBERON:0004120,2.04e-13,315;UBERON:0006603,2.04e-13,315;UBERON:0002384,1.40e-10,371 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.726991193897824,1.88937971844405,0.485168122375632,1.16214518452842,0.822335776043652,2.16794459626573,4.31538588483226,1.5369642391746,2.83778675866302,1.37898272294647,1.29096936716765,2.70852973188684,0.941211697713023,0.545812300115692,0.898893937780338,1.53041946185451,1.28371610830437,0.639337125799041,3.62836430205388,1.79517291859469,1.27867425159808,3.77272010217159,0.56738522469114,2.4912889959823,6.78371396193207,4.17186334736161,2.6062661364614,5.44859552370032,1.10483290796269,4.1140110367315,0.422510572623884,1.06302149982522,0.209658645508376,0.336985893439485,0.450530678524519,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59637914923747,0.870648686496336,4.78648657867915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,0.702012795417713,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,4.52031382288914,27.4084121327941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,20.9413021442817,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,2.27858874869665,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr16:21652353..21652374,- | |||
}} | }} |
Latest revision as of 07:06, 25 July 2015
Short description: | p@chr16:21652353..21652374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:21652353..21652374, - |
Coexpression cluster: | C469_Neutrophils_Monocytederived_CD14_CD19_Eosinophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.42e-91 | 48 |
phagocyte | 4.42e-91 | 48 |
monopoietic cell | 2.99e-83 | 59 |
monocyte | 2.99e-83 | 59 |
monoblast | 2.99e-83 | 59 |
promonocyte | 2.99e-83 | 59 |
macrophage dendritic cell progenitor | 2.16e-80 | 61 |
myeloid leukocyte | 1.19e-77 | 72 |
myeloid lineage restricted progenitor cell | 5.44e-74 | 66 |
granulocyte monocyte progenitor cell | 8.00e-73 | 67 |
classical monocyte | 4.05e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.05e-69 | 42 |
myeloid cell | 3.53e-50 | 108 |
common myeloid progenitor | 3.53e-50 | 108 |
nongranular leukocyte | 1.99e-40 | 115 |
leukocyte | 8.93e-39 | 136 |
hematopoietic lineage restricted progenitor cell | 1.58e-38 | 120 |
hematopoietic oligopotent progenitor cell | 6.46e-32 | 161 |
hematopoietic multipotent progenitor cell | 6.46e-32 | 161 |
hematopoietic stem cell | 2.34e-30 | 168 |
hematopoietic cell | 1.56e-28 | 177 |
macrophage | 2.34e-25 | 6 |
mesenchymal cell | 2.23e-11 | 354 |
connective tissue cell | 4.85e-11 | 361 |
motile cell | 7.44e-10 | 386 |
neutrophil | 3.08e-09 | 3 |
multi fate stem cell | 2.12e-08 | 427 |
somatic stem cell | 3.36e-08 | 433 |
stem cell | 6.12e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.11e-63 | 76 |
bone element | 1.11e-58 | 82 |
hematopoietic system | 1.78e-55 | 98 |
blood island | 1.78e-55 | 98 |
skeletal element | 4.81e-53 | 90 |
immune system | 3.55e-51 | 93 |
hemolymphoid system | 7.08e-50 | 108 |
skeletal system | 3.00e-47 | 100 |
musculoskeletal system | 3.47e-26 | 167 |
lateral plate mesoderm | 5.29e-24 | 203 |
mesoderm | 2.04e-13 | 315 |
mesoderm-derived structure | 2.04e-13 | 315 |
presumptive mesoderm | 2.04e-13 | 315 |
connective tissue | 1.40e-10 | 371 |