FFCP PHASE1:Hg19::chr16:21164864..21164874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:21164864..21164874,+ | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr16:21164864..21164874,+ | |description=CAGE_peak_at_chr16:21164864..21164874,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!1.38e-08!3;CL:0000861!1.38e-08!3 | |ontology_enrichment_celltype=CL:0002150!1.38e-08!3;CL:0000861!1.38e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000322;1.67e-09;3 | |ontology_enrichment_celltype_v019=CL:0000322;1.67e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.67e-23;10!UBERON:0005564;6.67e-23;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.67e-23;10!UBERON:0005564;6.67e-23;10 | ||
|ontology_enrichment_disease=DOID:162!1.65e-24!235;DOID:14566!1.09e-23!239;DOID:0050686!1.88e-15!137;DOID:305!1.35e-14!106;DOID:0050687!2.13e-12!143;DOID:1036!6.30e-12!8;DOID:2531!4.32e-09!51;DOID:0060083!4.32e-09!51;DOID:3119!4.13e-08!14;DOID:1240!4.53e-07!39 | |ontology_enrichment_disease=DOID:162!1.65e-24!235;DOID:14566!1.09e-23!239;DOID:0050686!1.88e-15!137;DOID:305!1.35e-14!106;DOID:0050687!2.13e-12!143;DOID:1036!6.30e-12!8;DOID:2531!4.32e-09!51;DOID:0060083!4.32e-09!51;DOID:3119!4.13e-08!14;DOID:1240!4.53e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:6193;2.78e-26;1!DOID:3350;7.30e-14;2!DOID:3910;1.37e-13;2 | |ontology_enrichment_disease_v019=DOID:6193;2.78e-26;1!DOID:3350;7.30e-14;2!DOID:3910;1.37e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,2.78e-26,1;DOID:3350,7.30e-14,2;DOID:3910,1.21e-13,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.07e-28;8!UBERON:0003135;6.76e-21;11!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0000991;2.65e-11;21!UBERON:0003101;8.06e-11;22!UBERON:0000079;8.06e-11;22!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0009856;1.92e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.07e-28;8!UBERON:0003135;6.76e-21;11!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0000991;2.65e-11;21!UBERON:0003101;8.06e-11;22!UBERON:0000079;8.06e-11;22!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0009856;1.92e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.17e-28,8;UBERON:0003135,7.00e-21,11;UBERON:0004903,1.21e-13,2;UBERON:0002173,1.21e-13,2;UBERON:0002186,1.21e-13,2;UBERON:0000991,2.70e-11,21;UBERON:0009196,2.70e-11,21;UBERON:0009117,2.70e-11,21;UBERON:0005564,2.70e-11,21;UBERON:0004176,8.20e-11,22;UBERON:0003101,8.20e-11,22;UBERON:0000079,8.20e-11,22;UBERON:0004821,1.54e-09,3;UBERON:0003215,1.54e-09,3;UBERON:0010368,1.54e-09,3;UBERON:0009911,1.54e-09,3;UBERON:0002299,1.54e-09,3;UBERON:0006524,1.54e-09,3;UBERON:0008874,1.54e-09,3;UBERON:0002169,1.54e-09,3;UBERON:0004894,1.54e-09,3 | |||
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| ||
|short_description=p@chr16:21164864..21164874,+ | |short_description=p@chr16:21164864..21164874,+ | ||
}} | }} |
Latest revision as of 07:03, 25 July 2015
Short description: | p@chr16:21164864..21164874, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:21164864..21164874, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 2.17e-28 | 8 |
male reproductive organ | 7.00e-21 | 11 |
bronchoalveolar duct junction | 1.21e-13 | 2 |
alveolar duct | 1.21e-13 | 2 |
bronchiole | 1.21e-13 | 2 |
gonad | 2.70e-11 | 21 |
indifferent external genitalia | 2.70e-11 | 21 |
indifferent gonad | 2.70e-11 | 21 |
gonad primordium | 2.70e-11 | 21 |
external genitalia | 8.20e-11 | 22 |
male organism | 8.20e-11 | 22 |
male reproductive system | 8.20e-11 | 22 |
pulmonary alveolus epithelium | 1.54e-09 | 3 |
alveolus | 1.54e-09 | 3 |
pulmonary lobule | 1.54e-09 | 3 |
lobule | 1.54e-09 | 3 |
alveolus of lung | 1.54e-09 | 3 |
alveolar system | 1.54e-09 | 3 |
pulmonary acinus | 1.54e-09 | 3 |
alveolar sac | 1.54e-09 | 3 |
alveolar wall | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.78e-26 | 1 |
mesenchymal cell neoplasm | 7.30e-14 | 2 |
lung adenocarcinoma | 1.21e-13 | 2 |