FFCP PHASE1:Hg19::chr16:19396252..19396261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:19396252..19396261,+ | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr16:19396252..19396261,+ | |description=CAGE_peak_at_chr16:19396252..19396261,+ | ||
|id=chr16:19396252..19396261,+ | |id=chr16:19396252..19396261,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000082;5.27e-15;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,5.27e-15,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.10e-10;29!UBERON:0001041;6.23e-10;30 | |||
|ontology_enrichment_disease=DOID:305!1.72e-10!106;DOID:0050687!2.34e-07!143;DOID:1749!2.80e-07!14;DOID:1324!5.99e-07!15 | |ontology_enrichment_disease=DOID:305!1.72e-10!106;DOID:0050687!2.34e-07!143;DOID:1749!2.80e-07!14;DOID:1324!5.99e-07!15 | ||
|ontology_enrichment_disease_v019=DOID:1324;1.13e-18;15!DOID:5409;7.35e-18;4!DOID:0050615;1.39e-17;16!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.13e-18,15;DOID:5409,7.35e-18,4;DOID:0050615,1.39e-17,16;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.96e-24!7;UBERON:0001173!2.96e-24!7;UBERON:0004912!2.96e-24!7;UBERON:0002394!3.10e-24!4;UBERON:0003928!3.10e-24!4;UBERON:0002048!5.01e-12!22;UBERON:0000117!5.01e-12!22;UBERON:0000171!5.01e-12!22;UBERON:0000170!5.01e-12!22;UBERON:0005597!5.01e-12!22;UBERON:0000118!5.01e-12!22;UBERON:0001154!5.05e-12!1;UBERON:0001153!5.05e-12!1;UBERON:0004913!7.76e-12!1;UBERON:0003703!7.76e-12!1;UBERON:0001174!7.76e-12!1;UBERON:0004914!7.76e-12!1;UBERON:0001007!4.00e-11!155;UBERON:0001555!4.00e-11!155;UBERON:0007026!4.00e-11!155;UBERON:0005178!8.29e-11!34;UBERON:0002224!8.29e-11!34;UBERON:0005181!1.73e-10!35;UBERON:0004119!4.94e-10!169;UBERON:0000925!4.94e-10!169;UBERON:0006595!4.94e-10!169;UBERON:0000077!6.64e-10!130;UBERON:0004921!7.01e-10!129;UBERON:0004185!7.01e-10!129;UBERON:0008947!1.26e-09!38;UBERON:0003258!1.26e-09!38;UBERON:0001041!2.28e-09!98;UBERON:0005911!2.76e-09!82;UBERON:0000466!1.59e-08!126;UBERON:0009854!1.45e-07!23;UBERON:0005153!4.28e-07!37;UBERON:0009497!5.96e-07!25;UBERON:0000015!5.96e-07!25;UBERON:0002423!5.96e-07!25;UBERON:0006235!5.96e-07!25;UBERON:0004161!5.96e-07!25;UBERON:0000915!6.41e-07!52;UBERON:0000065!8.83e-07!53 | |ontology_enrichment_uberon=UBERON:0002294!2.96e-24!7;UBERON:0001173!2.96e-24!7;UBERON:0004912!2.96e-24!7;UBERON:0002394!3.10e-24!4;UBERON:0003928!3.10e-24!4;UBERON:0002048!5.01e-12!22;UBERON:0000117!5.01e-12!22;UBERON:0000171!5.01e-12!22;UBERON:0000170!5.01e-12!22;UBERON:0005597!5.01e-12!22;UBERON:0000118!5.01e-12!22;UBERON:0001154!5.05e-12!1;UBERON:0001153!5.05e-12!1;UBERON:0004913!7.76e-12!1;UBERON:0003703!7.76e-12!1;UBERON:0001174!7.76e-12!1;UBERON:0004914!7.76e-12!1;UBERON:0001007!4.00e-11!155;UBERON:0001555!4.00e-11!155;UBERON:0007026!4.00e-11!155;UBERON:0005178!8.29e-11!34;UBERON:0002224!8.29e-11!34;UBERON:0005181!1.73e-10!35;UBERON:0004119!4.94e-10!169;UBERON:0000925!4.94e-10!169;UBERON:0006595!4.94e-10!169;UBERON:0000077!6.64e-10!130;UBERON:0004921!7.01e-10!129;UBERON:0004185!7.01e-10!129;UBERON:0008947!1.26e-09!38;UBERON:0003258!1.26e-09!38;UBERON:0001041!2.28e-09!98;UBERON:0005911!2.76e-09!82;UBERON:0000466!1.59e-08!126;UBERON:0009854!1.45e-07!23;UBERON:0005153!4.28e-07!37;UBERON:0009497!5.96e-07!25;UBERON:0000015!5.96e-07!25;UBERON:0002423!5.96e-07!25;UBERON:0006235!5.96e-07!25;UBERON:0004161!5.96e-07!25;UBERON:0000915!6.41e-07!52;UBERON:0000065!8.83e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;5.27e-15;19!UBERON:0000115;5.27e-15;19!UBERON:0002048;4.01e-13;22!UBERON:0004807;4.01e-13;22!UBERON:0000117;4.01e-13;22!UBERON:0000171;4.01e-13;22!UBERON:0000170;4.01e-13;22!UBERON:0005911;1.25e-08;36!UBERON:0000072;1.25e-08;37!UBERON:0005178;1.26e-08;34!UBERON:0002224;1.26e-08;34!UBERON:0005181;5.59e-08;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.27e-15,19;UBERON:0000115,5.27e-15,19;UBERON:0002048,4.01e-13,22;UBERON:0000117,4.01e-13,22;UBERON:0000171,4.01e-13,22;UBERON:0000170,4.01e-13,22;UBERON:0005597,4.01e-13,22;UBERON:0000118,4.01e-13,22;UBERON:0004807,1.47e-10,28;UBERON:0005178,6.80e-09,34;UBERON:0002224,6.80e-09,34;UBERON:0005181,1.14e-08,35;UBERON:0005153,2.92e-08,37;UBERON:0008947,4.52e-08,38;UBERON:0003258,4.52e-08,38;UBERON:0000072,1.00e-06,47;UBERON:0005157,1.00e-06,47 | |||
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|short_description=p@chr16:19396252..19396261,+ | |short_description=p@chr16:19396252..19396261,+ | ||
}} | }} |
Latest revision as of 06:48, 25 July 2015
Short description: | p@chr16:19396252..19396261, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:19396252..19396261, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 5.27e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.27e-15 | 19 |
lung epithelium | 5.27e-15 | 19 |
lung | 4.01e-13 | 22 |
respiratory tube | 4.01e-13 | 22 |
respiration organ | 4.01e-13 | 22 |
pair of lungs | 4.01e-13 | 22 |
lung primordium | 4.01e-13 | 22 |
lung bud | 4.01e-13 | 22 |
respiratory system epithelium | 1.47e-10 | 28 |
thoracic cavity element | 6.80e-09 | 34 |
thoracic cavity | 6.80e-09 | 34 |
thoracic segment organ | 1.14e-08 | 35 |
epithelial bud | 2.92e-08 | 37 |
respiratory primordium | 4.52e-08 | 38 |
endoderm of foregut | 4.52e-08 | 38 |
segment of respiratory tract | 1.00e-06 | 47 |
epithelial fold | 1.00e-06 | 47 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.13e-18 | 15 |
lung small cell carcinoma | 7.35e-18 | 4 |
respiratory system cancer | 1.39e-17 | 16 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |