FFCP PHASE1:Hg19::chr16:13495752..13495760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:13495752..13495760,- | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_at_chr16:13495752..13495760,- | |description=CAGE_peak_at_chr16:13495752..13495760,- | ||
|id=chr16:13495752..13495760,- | |id=chr16:13495752..13495760,- | ||
|ontology_enrichment_celltype=CL:0000650!1.51e-14!3;CL:1000618!1.51e-14!3;CL:1001318!1.51e-14!3;CL:0002173!1.51e-14!3;CL:1000500!1.51e-14!3;CL:0000239!3.39e-14!3;CL:1000615!3.39e-14!3;CL:0002306!3.39e-14!3;CL:0000064!7.51e-14!3;CL:0005012!7.51e-14!3;CL:0000067!7.51e-14!3;CL:0002304!7.51e-14!3;CL:1000497!8.75e-14!18;CL:0002518!8.75e-14!18;CL:1000507!1.23e-13!12;CL:1000494!1.23e-13!12;CL:0002681!1.32e-12!13;CL:0002584!1.32e-12!13;CL:0000319!2.68e-11!1;CL:1000449!2.79e-10!16;CL:0000669!4.32e-09!5;CL:1000612!9.93e-07!7;CL:1000746!9.93e-07!7 | |ontology_enrichment_celltype=CL:0000650!1.51e-14!3;CL:1000618!1.51e-14!3;CL:1001318!1.51e-14!3;CL:0002173!1.51e-14!3;CL:1000500!1.51e-14!3;CL:0000239!3.39e-14!3;CL:1000615!3.39e-14!3;CL:0002306!3.39e-14!3;CL:0000064!7.51e-14!3;CL:0005012!7.51e-14!3;CL:0000067!7.51e-14!3;CL:0002304!7.51e-14!3;CL:1000497!8.75e-14!18;CL:0002518!8.75e-14!18;CL:1000507!1.23e-13!12;CL:1000494!1.23e-13!12;CL:0002681!1.32e-12!13;CL:0002584!1.32e-12!13;CL:0000319!2.68e-11!1;CL:1000449!2.79e-10!16;CL:0000669!4.32e-09!5;CL:1000612!9.93e-07!7;CL:1000746!9.93e-07!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.48e-40;5 | |||
|ontology_enrichment_disease=DOID:3030!2.68e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000353!1.23e-14!17;UBERON:0003567!1.51e-14!3;UBERON:0003838!1.51e-14!3;UBERON:0005169!1.51e-14!3;UBERON:0002321!1.51e-14!3;UBERON:0005215!1.51e-14!3;UBERON:0002303!1.51e-14!3;UBERON:0002319!1.51e-14!3;UBERON:0006853!3.39e-14!3;UBERON:0007685!3.39e-14!3;UBERON:0004134!3.39e-14!3;UBERON:0001778!7.51e-14!3;UBERON:0001775!7.51e-14!3;UBERON:0009773!1.23e-13!12;UBERON:0001231!1.23e-13!12;UBERON:0004810!1.23e-13!12;UBERON:0001225!1.32e-12!13;UBERON:0008987!1.32e-12!13;UBERON:0001736!1.18e-11!1;UBERON:0006298!1.18e-11!1;UBERON:0001282!2.96e-11!1;UBERON:0009842!2.96e-11!1;UBERON:0003704!2.96e-11!1;UBERON:0001171!2.96e-11!1;UBERON:0001172!2.96e-11!1;UBERON:0000488!1.27e-10!4;UBERON:0001851!2.79e-10!16;UBERON:0004211!2.79e-10!16;UBERON:0001285!2.79e-10!16;UBERON:0007684!2.79e-10!16;UBERON:0003220!2.79e-10!16;UBERON:0004208!2.79e-10!16;UBERON:0006555!1.10e-09!17;UBERON:0005103!1.10e-09!17;UBERON:0000083!1.10e-09!17;UBERON:0009201!1.10e-09!17;UBERON:0004819!1.10e-09!17;UBERON:0006553!1.10e-09!17;UBERON:0003074!1.10e-09!17;UBERON:0003060!1.10e-09!17;UBERON:0003408!1.18e-09!10;UBERON:0000058!1.56e-09!26;UBERON:0000080!3.70e-09!18;UBERON:0002120!3.70e-09!18;UBERON:0004875!3.70e-09!18;UBERON:0005721!3.70e-09!18;UBERON:0005754!3.70e-09!18;UBERON:0007297!3.70e-09!18;UBERON:0002113!3.75e-09!27;UBERON:0003918!3.75e-09!27;UBERON:0005095!3.75e-09!27;UBERON:0007687!3.75e-09!27;UBERON:0003891!4.32e-09!5;UBERON:0003586!4.32e-09!5;UBERON:0007625!1.36e-08!11;UBERON:0004876!2.93e-08!20;UBERON:0003887!7.14e-08!21;UBERON:0001044!8.10e-08!6;UBERON:0003293!8.10e-08!6;UBERON:0003294!8.10e-08!6;UBERON:0010047!8.10e-08!6;UBERON:0000167!8.10e-08!6;UBERON:0000489!1.06e-07!32;UBERON:0002203!2.26e-07!6;UBERON:0001768!2.26e-07!6;UBERON:0000074!9.93e-07!7;UBERON:0001229!9.93e-07!7;UBERON:0001230!9.93e-07!7;UBERON:0005749!9.93e-07!7;UBERON:0004199!9.93e-07!7;UBERON:0004209!9.93e-07!7;UBERON:0004198!9.93e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.48e-40;5!UBERON:0002368;4.53e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.48e-40,5;UBERON:0004117,1.48e-40,5;UBERON:0007689,1.48e-40,5;UBERON:0007123,1.48e-40,5;UBERON:0003091,1.48e-40,5;UBERON:0009722,2.25e-19,11;UBERON:0007690,2.25e-19,11;UBERON:0008814,1.85e-12,18;UBERON:0002368,4.03e-07,35 | |||
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|short_description=p@chr16:13495752..13495760,- | |short_description=p@chr16:13495752..13495760,- | ||
}} | }} |
Latest revision as of 06:23, 25 July 2015
Short description: | p@chr16:13495752..13495760, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:13495752..13495760, - |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.48e-40 | 5 |
pharyngeal pouch | 1.48e-40 | 5 |
thyroid diverticulum | 1.48e-40 | 5 |
pharyngeal pouch 2 | 1.48e-40 | 5 |
thyroid primordium | 1.48e-40 | 5 |
entire pharyngeal arch endoderm | 2.25e-19 | 11 |
early pharyngeal endoderm | 2.25e-19 | 11 |
pharyngeal arch system | 1.85e-12 | 18 |
endocrine gland | 4.03e-07 | 35 |