FFCP PHASE1:Hg19::chr16:13010571..13010578,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:13010571..13010578,+ | |||
|coexpression_cluster_id=C89 | |coexpression_cluster_id=C89 | ||
|description=CAGE_peak_at_chr16:13010571..13010578,+ | |description=CAGE_peak_at_chr16:13010571..13010578,+ | ||
|id=chr16:13010571..13010578,+ | |id=chr16:13010571..13010578,+ | ||
|ontology_enrichment_celltype=CL:0000515!7.01e-18!4 | |ontology_enrichment_celltype=CL:0000515!7.01e-18!4 | ||
|ontology_enrichment_celltype_v019=CL:0000082;6.95e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,6.95e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29!UBERON:0001041;4.53e-08;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;3.10e-50;4!DOID:1325;1.78e-29;7!DOID:3904;1.78e-29;7!DOID:3905;2.62e-23;9!DOID:1324;1.22e-14;15!DOID:0050615;8.02e-14;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.10e-50,4;DOID:1325,1.78e-29,7;DOID:3904,1.78e-29,7;DOID:3905,2.62e-23,9;DOID:1324,1.22e-14,15;DOID:0050615,8.02e-14,16 | |||
|ontology_enrichment_uberon=UBERON:0000200!8.30e-31!6;UBERON:0001049!3.58e-23!57;UBERON:0005068!3.58e-23!57;UBERON:0006241!3.58e-23!57;UBERON:0007135!3.58e-23!57;UBERON:0002771!4.67e-23!3;UBERON:0001950!5.72e-22!20;UBERON:0000955!2.48e-21!69;UBERON:0006238!2.48e-21!69;UBERON:0001869!3.18e-21!32;UBERON:0001017!2.64e-20!82;UBERON:0002619!5.68e-20!22;UBERON:0002020!5.86e-20!34;UBERON:0003528!5.86e-20!34;UBERON:0001893!6.37e-20!34;UBERON:0002780!6.52e-20!41;UBERON:0001890!6.52e-20!41;UBERON:0006240!6.52e-20!41;UBERON:0003080!2.09e-19!42;UBERON:0005743!3.00e-19!86;UBERON:0002616!5.05e-19!59;UBERON:0000956!1.50e-17!25;UBERON:0000203!1.50e-17!25;UBERON:0000073!3.42e-17!94;UBERON:0001016!3.42e-17!94;UBERON:0003075!5.12e-17!86;UBERON:0007284!5.12e-17!86;UBERON:0002791!1.13e-16!33;UBERON:0002346!3.78e-16!90;UBERON:0003056!1.50e-15!61;UBERON:0001871!2.01e-15!7;UBERON:0000033!1.14e-12!123;UBERON:0000153!5.91e-12!129;UBERON:0007811!5.91e-12!129;UBERON:0007023!2.29e-10!115;UBERON:0003112!2.40e-09!1;UBERON:0000032!2.40e-09!1;UBERON:0005253!2.40e-09!1;UBERON:0003128!2.40e-09!1;UBERON:0002241!2.40e-09!1;UBERON:0001703!2.40e-09!1;UBERON:0004761!2.40e-09!1;UBERON:0009617!2.40e-09!1;UBERON:0001874!5.75e-09!1;UBERON:0007190!9.91e-09!1;UBERON:0002581!1.07e-08!1;UBERON:0002022!1.16e-08!1;UBERON:0004121!2.06e-08!169;UBERON:0000924!3.73e-08!173;UBERON:0006601!3.73e-08!173;UBERON:0001872!5.48e-07!5 | |ontology_enrichment_uberon=UBERON:0000200!8.30e-31!6;UBERON:0001049!3.58e-23!57;UBERON:0005068!3.58e-23!57;UBERON:0006241!3.58e-23!57;UBERON:0007135!3.58e-23!57;UBERON:0002771!4.67e-23!3;UBERON:0001950!5.72e-22!20;UBERON:0000955!2.48e-21!69;UBERON:0006238!2.48e-21!69;UBERON:0001869!3.18e-21!32;UBERON:0001017!2.64e-20!82;UBERON:0002619!5.68e-20!22;UBERON:0002020!5.86e-20!34;UBERON:0003528!5.86e-20!34;UBERON:0001893!6.37e-20!34;UBERON:0002780!6.52e-20!41;UBERON:0001890!6.52e-20!41;UBERON:0006240!6.52e-20!41;UBERON:0003080!2.09e-19!42;UBERON:0005743!3.00e-19!86;UBERON:0002616!5.05e-19!59;UBERON:0000956!1.50e-17!25;UBERON:0000203!1.50e-17!25;UBERON:0000073!3.42e-17!94;UBERON:0001016!3.42e-17!94;UBERON:0003075!5.12e-17!86;UBERON:0007284!5.12e-17!86;UBERON:0002791!1.13e-16!33;UBERON:0002346!3.78e-16!90;UBERON:0003056!1.50e-15!61;UBERON:0001871!2.01e-15!7;UBERON:0000033!1.14e-12!123;UBERON:0000153!5.91e-12!129;UBERON:0007811!5.91e-12!129;UBERON:0007023!2.29e-10!115;UBERON:0003112!2.40e-09!1;UBERON:0000032!2.40e-09!1;UBERON:0005253!2.40e-09!1;UBERON:0003128!2.40e-09!1;UBERON:0002241!2.40e-09!1;UBERON:0001703!2.40e-09!1;UBERON:0004761!2.40e-09!1;UBERON:0009617!2.40e-09!1;UBERON:0001874!5.75e-09!1;UBERON:0007190!9.91e-09!1;UBERON:0002581!1.07e-08!1;UBERON:0002022!1.16e-08!1;UBERON:0004121!2.06e-08!169;UBERON:0000924!3.73e-08!173;UBERON:0006601!3.73e-08!173;UBERON:0001872!5.48e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;6.95e-12;19!UBERON:0000115;6.95e-12;19!UBERON:0002048;1.80e-10;22!UBERON:0004807;1.80e-10;22!UBERON:0000117;1.80e-10;22!UBERON:0000171;1.80e-10;22!UBERON:0000170;1.80e-10;22!UBERON:0005911;4.53e-08;36!UBERON:0005178;2.32e-07;34!UBERON:0000072;2.32e-07;37!UBERON:0005181;2.32e-07;35!UBERON:0002224;2.32e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.95e-12,19;UBERON:0000115,6.95e-12,19;UBERON:0002048,1.80e-10,22;UBERON:0000117,1.80e-10,22;UBERON:0000171,1.80e-10,22;UBERON:0000170,1.80e-10,22;UBERON:0005597,1.80e-10,22;UBERON:0000118,1.80e-10,22;UBERON:0004807,1.52e-08,28;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p@chr16:13010571..13010578,+ | |short_description=p@chr16:13010571..13010578,+ | ||
}} | }} |
Latest revision as of 06:22, 25 July 2015
Short description: | p@chr16:13010571..13010578, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:13010571..13010578, + |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 6.95e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.95e-12 | 19 |
lung epithelium | 6.95e-12 | 19 |
lung | 1.80e-10 | 22 |
respiratory tube | 1.80e-10 | 22 |
respiration organ | 1.80e-10 | 22 |
pair of lungs | 1.80e-10 | 22 |
lung primordium | 1.80e-10 | 22 |
lung bud | 1.80e-10 | 22 |
respiratory system epithelium | 1.52e-08 | 28 |
thoracic cavity element | 2.74e-07 | 34 |
thoracic cavity | 2.74e-07 | 34 |
thoracic segment organ | 4.03e-07 | 35 |
epithelial bud | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.10e-50 | 4 |
bronchus cancer | 1.78e-29 | 7 |
bronchogenic carcinoma | 1.78e-29 | 7 |
lung carcinoma | 2.62e-23 | 9 |
lung cancer | 1.22e-14 | 15 |
respiratory system cancer | 8.02e-14 | 16 |