FFCP PHASE1:Hg19::chr15:99669659..99669674,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:99669659..99669674,+ | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_at_chr15:99669659..99669674,+ | |description=CAGE_peak_at_chr15:99669659..99669674,+ | ||
|id=chr15:99669659..99669674,+ | |id=chr15:99669659..99669674,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.87e-07;2!CL:0000242;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.45e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.73e-14;1!UBERON:0000358;5.49e-14;1!UBERON:0005754;5.49e-14;1!UBERON:0009143;1.25e-13;1!UBERON:0005425;1.25e-13;1!UBERON:0007297;1.23e-07;2!UBERON:0008814;1.87e-07;2!UBERON:0010056;1.87e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;5.59e-26;2!DOID:178;1.25e-13;1!DOID:326;1.25e-13;1!DOID:3978;1.25e-13;1!DOID:3394;1.25e-13;1!DOID:5844;1.25e-13;1!DOID:1287;1.67e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.63e-26,2;DOID:178,9.73e-14,1;DOID:326,9.73e-14,1;DOID:3978,9.73e-14,1;DOID:3394,9.73e-14,1;DOID:5844,9.73e-14,1;DOID:1287,1.52e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.28e-46!115;UBERON:0005743!8.79e-24!86;UBERON:0001017!8.28e-23!82;UBERON:0000073!9.92e-22!94;UBERON:0001016!9.92e-22!94;UBERON:0002020!1.01e-19!34;UBERON:0003528!1.01e-19!34;UBERON:0001049!2.33e-19!57;UBERON:0005068!2.33e-19!57;UBERON:0006241!2.33e-19!57;UBERON:0007135!2.33e-19!57;UBERON:0003075!6.14e-19!86;UBERON:0007284!6.14e-19!86;UBERON:0002791!1.78e-18!33;UBERON:0001893!9.40e-18!34;UBERON:0002346!1.39e-17!90;UBERON:0000955!2.44e-17!69;UBERON:0006238!2.44e-17!69;UBERON:0002780!8.32e-17!41;UBERON:0001890!8.32e-17!41;UBERON:0006240!8.32e-17!41;UBERON:0003080!3.03e-16!42;UBERON:0001869!1.04e-15!32;UBERON:0002616!1.66e-15!59;UBERON:0003056!3.06e-14!61;UBERON:0004121!4.04e-12!169;UBERON:0002619!5.02e-12!22;UBERON:0000956!8.26e-12!25;UBERON:0000203!8.26e-12!25;UBERON:0001950!9.02e-12!20;UBERON:0000924!1.58e-11!173;UBERON:0006601!1.58e-11!173;UBERON:0000033!3.82e-11!123;UBERON:0000153!5.95e-11!129;UBERON:0007811!5.95e-11!129;UBERON:0002420!1.63e-10!9;UBERON:0007245!1.63e-10!9;UBERON:0010009!1.63e-10!9;UBERON:0010011!1.63e-10!9;UBERON:0000454!1.63e-10!9;UBERON:0002308!3.35e-10!9;UBERON:0000125!3.35e-10!9;UBERON:0009663!7.48e-08!7;UBERON:0001871!4.02e-07!7;UBERON:0002298!4.46e-07!8;UBERON:0000369!9.00e-07!4;UBERON:0002435!9.00e-07!4;UBERON:0000204!9.00e-07!4;UBERON:0010082!9.00e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!3.28e-46!115;UBERON:0005743!8.79e-24!86;UBERON:0001017!8.28e-23!82;UBERON:0000073!9.92e-22!94;UBERON:0001016!9.92e-22!94;UBERON:0002020!1.01e-19!34;UBERON:0003528!1.01e-19!34;UBERON:0001049!2.33e-19!57;UBERON:0005068!2.33e-19!57;UBERON:0006241!2.33e-19!57;UBERON:0007135!2.33e-19!57;UBERON:0003075!6.14e-19!86;UBERON:0007284!6.14e-19!86;UBERON:0002791!1.78e-18!33;UBERON:0001893!9.40e-18!34;UBERON:0002346!1.39e-17!90;UBERON:0000955!2.44e-17!69;UBERON:0006238!2.44e-17!69;UBERON:0002780!8.32e-17!41;UBERON:0001890!8.32e-17!41;UBERON:0006240!8.32e-17!41;UBERON:0003080!3.03e-16!42;UBERON:0001869!1.04e-15!32;UBERON:0002616!1.66e-15!59;UBERON:0003056!3.06e-14!61;UBERON:0004121!4.04e-12!169;UBERON:0002619!5.02e-12!22;UBERON:0000956!8.26e-12!25;UBERON:0000203!8.26e-12!25;UBERON:0001950!9.02e-12!20;UBERON:0000924!1.58e-11!173;UBERON:0006601!1.58e-11!173;UBERON:0000033!3.82e-11!123;UBERON:0000153!5.95e-11!129;UBERON:0007811!5.95e-11!129;UBERON:0002420!1.63e-10!9;UBERON:0007245!1.63e-10!9;UBERON:0010009!1.63e-10!9;UBERON:0010011!1.63e-10!9;UBERON:0000454!1.63e-10!9;UBERON:0002308!3.35e-10!9;UBERON:0000125!3.35e-10!9;UBERON:0009663!7.48e-08!7;UBERON:0001871!4.02e-07!7;UBERON:0002298!4.46e-07!8;UBERON:0000369!9.00e-07!4;UBERON:0002435!9.00e-07!4;UBERON:0000204!9.00e-07!4;UBERON:0010082!9.00e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.39e-18;3!UBERON:0004054;8.39e-18;3!UBERON:0000989;3.73e-14;1!UBERON:0008811;3.73e-14;1!UBERON:0001000;5.49e-14;1!UBERON:0000998;5.49e-14;1!UBERON:0006868;5.49e-14;1!UBERON:0005352;5.49e-14;1!UBERON:0002135;1.25e-13;1!UBERON:0000941;1.25e-13;1!UBERON:0001785;1.25e-13;1!UBERON:0002464;1.25e-13;1!UBERON:0004904;1.25e-13;1!UBERON:0001021;1.25e-13;1!UBERON:0005904;1.34e-13;4!UBERON:0003135;5.60e-11;11!UBERON:0001255;1.23e-07;2!UBERON:0001556;1.23e-07;2!UBERON:0003714;1.87e-07;2!UBERON:0005162;1.87e-07;2!UBERON:0000122;1.87e-07;2!UBERON:0002133;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.72e-18,3;UBERON:0004054,7.72e-18,3;UBERON:0000989,3.50e-14,1;UBERON:0008811,3.50e-14,1;UBERON:0006258,3.50e-14,1;UBERON:0005876,3.50e-14,1;UBERON:0004874,3.50e-14,1;UBERON:0000998,4.53e-14,1;UBERON:0006868,4.53e-14,1;UBERON:0001000,5.85e-14,1;UBERON:0005352,5.85e-14,1;UBERON:0000941,1.25e-13,1;UBERON:0001785,1.25e-13,1;UBERON:0002464,1.25e-13,1;UBERON:0004904,1.25e-13,1;UBERON:0001021,1.25e-13,1;UBERON:0003902,1.25e-13,1;UBERON:0005425,1.25e-13,1;UBERON:0005904,1.26e-13,4;UBERON:0002135,2.07e-13,1;UBERON:0007023,6.53e-12,114;UBERON:0003135,5.33e-11,11;UBERON:0001255,1.20e-07,2;UBERON:0001556,1.20e-07,2;UBERON:0003714,1.87e-07,2;UBERON:0005162,1.87e-07,2;UBERON:0000122,1.87e-07,2;UBERON:0002133,2.40e-07,2 | |||
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|short_description=p@chr15:99669659..99669674,+ | |short_description=p@chr15:99669659..99669674,+ | ||
}} | }} |
Latest revision as of 06:00, 25 July 2015
Short description: | p@chr15:99669659..99669674, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:99669659..99669674, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.72e-18 | 3 |
internal male genitalia | 7.72e-18 | 3 |
penis | 3.50e-14 | 1 |
intromittent organ | 3.50e-14 | 1 |
lateral plate mesenchyme | 3.50e-14 | 1 |
undifferentiated genital tubercle | 3.50e-14 | 1 |
somatopleure | 3.50e-14 | 1 |
seminal vesicle | 4.53e-14 | 1 |
seminal fluid secreting gland | 4.53e-14 | 1 |
vas deferens | 5.85e-14 | 1 |
spermatic cord | 5.85e-14 | 1 |
cranial nerve II | 1.25e-13 | 1 |
cranial nerve | 1.25e-13 | 1 |
nerve trunk | 1.25e-13 | 1 |
nerve connecting eye with brain | 1.25e-13 | 1 |
nerve | 1.25e-13 | 1 |
retinal neural layer | 1.25e-13 | 1 |
presumptive neural retina | 1.25e-13 | 1 |
duct of male reproductive system | 1.26e-13 | 4 |
mitral valve | 2.07e-13 | 1 |
adult organism | 6.53e-12 | 114 |
male reproductive organ | 5.33e-11 | 11 |
urinary bladder | 1.20e-07 | 2 |
lower urinary tract | 1.20e-07 | 2 |
neural tissue | 1.87e-07 | 2 |
multi cell component structure | 1.87e-07 | 2 |
neuron projection bundle | 1.87e-07 | 2 |
atrioventricular valve | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.63e-26 | 2 |
vascular disease | 9.73e-14 | 1 |
ischemia | 9.73e-14 | 1 |
extrinsic cardiomyopathy | 9.73e-14 | 1 |
myocardial ischemia | 9.73e-14 | 1 |
myocardial infarction | 9.73e-14 | 1 |
cardiovascular system disease | 1.52e-13 | 4 |