FFCP PHASE1:Hg19::chr15:96607616..96607625,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000558860_5end | |association_with_transcript=29bp_to_ENST00000558860_5end | ||
|cluster_id=chr15:96607616..96607625,- | |||
|coexpression_cluster_id=C159 | |coexpression_cluster_id=C159 | ||
|description=CAGE_peak_3_at_ENST00000558860_5end | |description=CAGE_peak_3_at_ENST00000558860_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000313!8.58e-14!1;CL:0002563!1.11e-13!4;CL:0002253!1.20e-07!2;CL:0000159!1.54e-07!2 | |ontology_enrichment_celltype=CL:0000313!8.58e-14!1;CL:0002563!1.11e-13!4;CL:0002253!1.20e-07!2;CL:0000159!1.54e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.21e-13;4!CL:0002552;3.42e-11;5!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7 | |ontology_enrichment_celltype_v019=CL:0002563;1.21e-13;4!CL:0002552;3.42e-11;5!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.13e-13,4;CL:0002552,3.60e-11,5;CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1799!7.55e-14!1;DOID:10165!7.55e-14!1;DOID:1798!7.55e-14!1;DOID:2152!8.58e-14!1;DOID:4468!9.87e-08!2 | |ontology_enrichment_disease=DOID:1799!7.55e-14!1;DOID:10165!7.55e-14!1;DOID:1798!7.55e-14!1;DOID:2152!8.58e-14!1;DOID:4468!9.87e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;5.56e-26;2 | |ontology_enrichment_disease_v019=DOID:4468;5.56e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0004911!8.58e-14!1;UBERON:0001242!1.11e-13!4;UBERON:0001262!1.11e-13!4;UBERON:0004786!1.11e-13!4;UBERON:0004808!1.11e-13!4;UBERON:0001277!1.11e-13!4;UBERON:0002038!1.25e-13!1;UBERON:0009661!1.25e-13!1;UBERON:0003350!3.92e-11!5;UBERON:0003124!4.75e-08!7;UBERON:0004909!1.54e-07!2;UBERON:0002950!1.87e-07!2;UBERON:0001891!1.87e-07!2;UBERON:0009616!1.87e-07!2 | |ontology_enrichment_uberon=UBERON:0004911!8.58e-14!1;UBERON:0001242!1.11e-13!4;UBERON:0001262!1.11e-13!4;UBERON:0004786!1.11e-13!4;UBERON:0004808!1.11e-13!4;UBERON:0001277!1.11e-13!4;UBERON:0002038!1.25e-13!1;UBERON:0009661!1.25e-13!1;UBERON:0003350!3.92e-11!5;UBERON:0003124!4.75e-08!7;UBERON:0004909!1.54e-07!2;UBERON:0002950!1.87e-07!2;UBERON:0001891!1.87e-07!2;UBERON:0009616!1.87e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0000344;6.30e-11;20!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001828;1.75e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0000344;6.30e-11;20!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001828;1.75e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0000344,6.30e-11,20;UBERON:0003350,1.69e-07,8;UBERON:0001828,1.80e-07,8;UBERON:0000485,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37804494041792,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,4.24405301213784,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37804494041792,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,4.24405301213784,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENST00000558860 | |short_description=p3@ENST00000558860 | ||
}} | }} |
Latest revision as of 05:52, 25 July 2015
Short description: | p3@ENST00000558860 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000558860_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | 29bp_to_ENST00000558860_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.13e-13 | 4 |
fibroblast of gingiva | 3.60e-11 | 5 |
germ line cell | 1.89e-08 | 7 |
germ cell | 1.89e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
mucosa | 6.30e-11 | 20 |
epithelium of mucosa | 1.69e-07 | 8 |
gingiva | 1.80e-07 | 8 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.56e-26 | 2 |