FFCP PHASE1:Hg19::chr15:90335468..90335503,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:90335468..90335503,-
|short_description=p@chr15:90335468..90335503,-
|description=CAGE_peak_at_chr15:90335468..90335503,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:90335468..90335503,- | |||
|coexpression_cluster_id=C403 | |||
|description=CAGE_peak_at_chr15:90335468..90335503,- | |||
|id=chr15:90335468..90335503,- | |||
|ontology_enrichment_celltype=CL:0000048!2.75e-23!430;CL:0000723!4.40e-23!436;CL:0000034!1.99e-21!444;CL:0000055!6.69e-18!180;CL:0002371!2.57e-15!591;CL:0000680!8.80e-15!57;CL:0000056!8.80e-15!57;CL:0000355!8.80e-15!57;CL:0000057!1.24e-13!75;CL:0000183!2.85e-13!59;CL:0002320!4.38e-13!365;CL:0000187!6.25e-13!54;CL:0000134!7.33e-12!358;CL:0000144!9.71e-11!625;CL:0000192!1.40e-10!42;CL:0000514!1.40e-10!42;CL:0000393!3.28e-10!60;CL:0000211!3.28e-10!60;CL:0002620!4.48e-09!23;CL:0000219!5.73e-09!390;CL:0000359!7.84e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0002559;5.04e-08;5!CL:0000135;1.41e-07;3!CL:0000388;1.41e-07;3!CL:0000680;3.60e-07;7!CL:0000515;3.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.30e-09,433;CL:0000048,3.08e-09,427;CL:0000034,7.27e-09,441;CL:0002559,5.57e-08,5;CL:0000135,1.58e-07,3;CL:0000388,1.58e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.54e-18!167;UBERON:0004290!2.27e-16!70;UBERON:0000914!1.25e-15!83;UBERON:0002329!1.25e-15!83;UBERON:0003077!1.25e-15!83;UBERON:0003059!1.25e-15!83;UBERON:0007282!1.25e-15!83;UBERON:0009618!1.25e-15!83;UBERON:0007285!1.25e-15!83;UBERON:0005256!4.51e-13!143;UBERON:0002385!5.96e-13!63;UBERON:0001015!5.96e-13!63;UBERON:0000383!5.96e-13!63;UBERON:0000486!6.54e-13!82;UBERON:0001134!9.38e-13!61;UBERON:0002036!9.38e-13!61;UBERON:0003082!9.38e-13!61;UBERON:0002384!1.55e-12!375;UBERON:0000926!1.23e-11!448;UBERON:0004120!1.23e-11!448;UBERON:0006603!1.23e-11!448;UBERON:0002100!1.88e-08!216;UBERON:0003081!2.09e-08!216;UBERON:0002199!3.14e-08!45;UBERON:0002416!3.14e-08!45;UBERON:0001637!9.90e-08!42;UBERON:0003509!9.90e-08!42;UBERON:0004572!9.90e-08!42;UBERON:0004535!1.37e-07!110;UBERON:0004573!1.87e-07!33;UBERON:0004571!1.87e-07!33;UBERON:0000490!2.34e-07!138;UBERON:0001009!5.79e-07!113;UBERON:0002049!7.50e-07!79;UBERON:0007798!7.50e-07!79;UBERON:0000479!7.94e-07!787;UBERON:0001135!8.11e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;5.04e-08;5!UBERON:0007846;1.41e-07;3!UBERON:0000043;1.41e-07;3!UBERON:0007845;1.41e-07;3!UBERON:0002072;5.61e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.63e-09,78;UBERON:0002204,3.49e-09,167;UBERON:0002329,3.79e-09,71;UBERON:0003059,3.79e-09,71;UBERON:0007282,3.79e-09,71;UBERON:0004290,3.79e-09,71;UBERON:0009618,3.79e-09,71;UBERON:0003077,6.11e-09,72;UBERON:0007285,6.11e-09,72;UBERON:0007524,9.71e-09,73;UBERON:0002073,5.57e-08,5;UBERON:0005086,5.57e-08,5;UBERON:0000486,7.80e-08,83;UBERON:0000926,1.37e-07,315;UBERON:0004120,1.37e-07,315;UBERON:0006603,1.37e-07,315;UBERON:0007846,1.58e-07,3;UBERON:0000043,1.58e-07,3;UBERON:0007845,1.58e-07,3;UBERON:0002072,5.81e-07,5 | |||
|phase1_expression=0.726713517082227,1.49870366723688,0.140954404095971,1.0007329835313,0,0,0,1.26343974685366,1.30592814099919,0,0,0,0,1.23766352960047,0.662794751455832,1.34465029290355,0.602694528023977,1.46062018077475,2.43966399395253,0.246242116153576,1.02000345622126,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.868043482863407,0,0,0,1.30858414901608,0.377875943688809,0.242584061187816,0.697287110717054,0.822335776043652,0,2.8769239232215,1.0246428261164,0.47296445977717,1.72372840368309,0,2.70852973188684,1.69418105588344,1.09162460023138,0.674170453335254,2.75475503133812,0,0,0.329851300186716,0.598390972864896,0,0.870627715885752,1.13477044938228,0,2.00998932205395,0.521482918420201,0,1.81619850790011,0.368277635987565,0.316462387440884,0,0,0,0,0.300353785683013,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,1.00267582127178,1.01392563272577,0.795285947051099,0,0,0,0,0.851363990735132,0,0,0.324547393654683,0.348259474598534,1.59549552622638,0,0,0,0,0,0.694281003215189,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0.488124115096339,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.759783069987479,0.132409180813219,0.860509862246441,1.06400514659507,0,0,0.24666754841716,0,0,0.326923806226917,0.302714855289863,1.15235184896,0.234321431833797,1.5608003841516,0.570471821544449,4.93180645820944,1.40921398372518,0.161872944368132,0.98315564691574,0.816616685019573,0.859840221182376,1.34323515528495,0,0.741800787835671,1.82032272387605,1.43723628363248,0.336672227908132,0.250237039743928,0.277064115484183,0,0.30648779579902,0,0.226864366320042,0.538168907066586,0.640672166455702,0.635795703478686,1.50045548042201,1.33968288009971,0.515281080091258,0.18611685633159,0.843881661206331,0.584622030967192,0.252433774244115,0.184099797284599,0.323292113637624,0.355009592516614,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,4.69348596989448,9.00537313470039,0,4.17931135228781,6.49691533502627,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,5.07020139287323,0,0.590789906681404,0,0,0,0,1.1240175325762,0,0.0925884451585296,0,1.03993478527958,1.44331342025273,0,0,0.288732895522148,0,0,0,0,1.23108503043699,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.5867062865676,0,3.57656445851882,6.762422020448,0,0,0.257207374262142,0,0.799266537048298,1.00084595560703,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,2.31650090668127,5.54786070886035,1.07436577943937,0,0,0,0,0,0,0,0,0,2.24702107184155,14.9580729602012,0.414415513436035,0,1.50051156317903,0,0.207970861530807,1.60586089917446,0.788512075169673,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,3.30157734978715,0.391602314925481,1.37257369524342,0,0.215714200818617,0.213455115606889,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,0,0,0,0,4.47208112027701,3.01854933032316,0.574890092096664,6.75030757938707,4.76462551685833,0,0,0.0920809889358963,0.114814448164607,0.546273504020151,0.393373244878272,0,0,0,0,0.105551628892876,1.13733384070897,1.02056223165909,0,0,0,0,0.509752546090077,0,0.671624264166535,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.48335359146061,1.07834031980251,0.767518373630648,0.689182862422653,1.07420244868274,1.88521702088497,0.852266274161009,0,0,0,0,0,1.85938219718914,2.20368642781448,0.6970372701606,0.616067160352178,0,0.869932992075073,0.37064843820784,0,0.372158369359667,0.632758849437452,0.38126038784765,0.511795582622668,0.42793898803392,0.95460974377781,0.78494864019923,0.539617372749944,0.274537029736055,0.589062011728432,0.808729926293264,0,0,0,4.38684281336312,0,0.272999822815972,1.69686518344455,2.26016233240486,1.65409603063837,1.32687795048244,0.876901770507525,0.578775534266688,0.655894752046633,0,0.30982349809975,0.281695602532241,0.286822704408103,0,0,1.06428319221179,0.844430541190656,1.64647446479951,0.379473173765715,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0,2.02979043692868,0,1.13929437434833,0.476463550915578,0,0.648473311192717,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0.338583555603207,0,0.403599414382095,0,0,0.307240764308458,0,0.333698283423817,0.390776190804081,0,0,1.08182271390393,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,2.0345239835768,0.611030144933625,0,0,0,0,0,0,0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| ||
|short_description=p@chr15:90335468..90335503,- | |||
}} | }} |
Latest revision as of 05:21, 25 July 2015
Short description: | p@chr15:90335468..90335503, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:90335468..90335503, - |
Coexpression cluster: | C403_small_Neutrophils_temporal_leiomyoma_Hair_colon_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.30e-09 | 433 |
multi fate stem cell | 3.08e-09 | 427 |
stem cell | 7.27e-09 | 441 |
hair follicle cell | 5.57e-08 | 5 |
fibrocyte | 1.58e-07 | 3 |
tendon cell | 1.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.63e-09 | 78 |
musculoskeletal system | 3.49e-09 | 167 |
somite | 3.79e-09 | 71 |
presomitic mesoderm | 3.79e-09 | 71 |
presumptive segmental plate | 3.79e-09 | 71 |
dermomyotome | 3.79e-09 | 71 |
trunk paraxial mesoderm | 3.79e-09 | 71 |
paraxial mesoderm | 6.11e-09 | 72 |
presumptive paraxial mesoderm | 6.11e-09 | 72 |
dense mesenchyme tissue | 9.71e-09 | 73 |
hair follicle | 5.57e-08 | 5 |
hair follicle placode | 5.57e-08 | 5 |
multilaminar epithelium | 7.80e-08 | 83 |
mesoderm | 1.37e-07 | 315 |
mesoderm-derived structure | 1.37e-07 | 315 |
presumptive mesoderm | 1.37e-07 | 315 |
dense regular connective tissue | 1.58e-07 | 3 |
tendon | 1.58e-07 | 3 |
regular connective tissue | 1.58e-07 | 3 |
hypodermis | 5.81e-07 | 5 |