FFCP PHASE1:Hg19::chr15:86127368..86127397,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:86127368..86127397,+ | |||
|coexpression_cluster_id=C2353 | |||
|description=CAGE_peak_at_chr15:86127368..86127397,+ | |description=CAGE_peak_at_chr15:86127368..86127397,+ | ||
|id=chr15:86127368..86127397,+ | |id=chr15:86127368..86127397,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.28e-70!140;CL:0000037!3.21e-53!172;CL:0000566!3.21e-53!172;CL:0002057!6.21e-52!42;CL:0000988!3.49e-49!182;CL:0002031!8.67e-48!124;CL:0000860!9.92e-48!45;CL:0002032!2.37e-47!165;CL:0000837!2.37e-47!165;CL:0000766!3.35e-46!76;CL:0002087!1.03e-45!119;CL:0000557!1.54e-38!71;CL:0002009!1.31e-35!65;CL:0000763!2.86e-35!112;CL:0000049!2.86e-35!112;CL:0000839!1.41e-34!70;CL:0002194!2.49e-32!63;CL:0000576!2.49e-32!63;CL:0000040!2.49e-32!63;CL:0000559!2.49e-32!63;CL:0000134!6.81e-19!358;CL:0002320!3.89e-18!365;CL:0000219!1.76e-15!390;CL:0000034!3.27e-13!444;CL:0000048!6.52e-13!430;CL:0000094!8.35e-13!8;CL:0000723!1.86e-12!436;CL:0000451!2.76e-11!10;CL:0002393!3.91e-11!9;CL:0002397!3.91e-11!9;CL:0000838!5.17e-11!52;CL:0000453!5.60e-11!5;CL:0000542!1.05e-10!53;CL:0000051!1.05e-10!53;CL:0000624!4.95e-09!6;CL:0000081!5.85e-09!11;CL:0000623!3.93e-08!3;CL:0000825!3.93e-08!3;CL:0000990!4.20e-08!8;CL:0000767!1.48e-07!3;CL:0000842!5.14e-07!3;CL:0000784!7.91e-07!3 | |ontology_enrichment_celltype=CL:0000738!5.28e-70!140;CL:0000037!3.21e-53!172;CL:0000566!3.21e-53!172;CL:0002057!6.21e-52!42;CL:0000988!3.49e-49!182;CL:0002031!8.67e-48!124;CL:0000860!9.92e-48!45;CL:0002032!2.37e-47!165;CL:0000837!2.37e-47!165;CL:0000766!3.35e-46!76;CL:0002087!1.03e-45!119;CL:0000557!1.54e-38!71;CL:0002009!1.31e-35!65;CL:0000763!2.86e-35!112;CL:0000049!2.86e-35!112;CL:0000839!1.41e-34!70;CL:0002194!2.49e-32!63;CL:0000576!2.49e-32!63;CL:0000040!2.49e-32!63;CL:0000559!2.49e-32!63;CL:0000134!6.81e-19!358;CL:0002320!3.89e-18!365;CL:0000219!1.76e-15!390;CL:0000034!3.27e-13!444;CL:0000048!6.52e-13!430;CL:0000094!8.35e-13!8;CL:0000723!1.86e-12!436;CL:0000451!2.76e-11!10;CL:0002393!3.91e-11!9;CL:0002397!3.91e-11!9;CL:0000838!5.17e-11!52;CL:0000453!5.60e-11!5;CL:0000542!1.05e-10!53;CL:0000051!1.05e-10!53;CL:0000624!4.95e-09!6;CL:0000081!5.85e-09!11;CL:0000623!3.93e-08!3;CL:0000825!3.93e-08!3;CL:0000990!4.20e-08!8;CL:0000767!1.48e-07!3;CL:0000842!5.14e-07!3;CL:0000784!7.91e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.61e-19;33!CL:0002057;3.61e-19;33!CL:0000094;6.01e-18;8!CL:0002393;3.14e-17;6!CL:0002397;3.14e-17;6!CL:0000766;3.94e-17;69!CL:0000576;9.58e-15;48!CL:0000623;2.86e-14;3!CL:0000473;5.00e-14;39!CL:0000234;5.00e-14;39!CL:0000767;3.75e-13;3!CL:0002087;5.48e-13;104!CL:0000081;6.87e-13;11!CL:0000738;1.10e-11;136!CL:0001014;5.93e-10;2!CL:0001016;5.93e-10;2!CL:0000771;3.68e-09;2!CL:0000451;4.51e-09;10!CL:0000097;8.86e-09;5!CL:0000763;1.53e-08;100!CL:0000988;1.58e-08;177!CL:0000453;3.31e-08;5!CL:0000791;4.94e-08;18!CL:0000789;4.94e-08;18!CL:0002419;4.94e-08;18!CL:0000624;5.28e-07;6!CL:0000219;5.47e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.52e-58,136;CL:0000037,1.52e-45,168;CL:0000988,8.92e-43,177;CL:0002032,3.74e-39,161;CL:0000837,3.74e-39,161;CL:0000766,1.27e-37,72;CL:0002031,3.30e-37,120;CL:0002087,1.96e-31,115;CL:0000860,1.89e-30,42;CL:0002057,1.89e-30,42;CL:0000557,2.06e-29,67;CL:0000763,3.52e-29,108;CL:0000049,3.52e-29,108;CL:0000473,4.54e-26,48;CL:0000234,4.54e-26,48;CL:0000839,1.61e-24,66;CL:0002009,4.02e-24,61;CL:0002194,6.07e-20,59;CL:0000576,6.07e-20,59;CL:0000040,6.07e-20,59;CL:0000559,6.07e-20,59;CL:0000094,5.66e-18,8;CL:0000134,8.90e-17,354;CL:0002320,2.87e-16,361;CL:0000219,1.78e-14,386;CL:0000623,2.86e-14,3;CL:0000825,2.86e-14,3;CL:0000034,2.35e-13,441;CL:0000767,3.67e-13,3;CL:0000081,6.58e-13,11;CL:0000048,2.77e-12,427;CL:0000723,5.57e-12,433;CL:0002393,1.88e-11,9;CL:0002397,1.88e-11,9;CL:0001014,5.93e-10,2;CL:0001016,5.93e-10,2;CL:0000838,1.88e-09,52;CL:0000542,3.16e-09,53;CL:0000051,3.16e-09,53;CL:0000771,3.68e-09,2;CL:0000451,4.71e-09,10;CL:0000097,8.86e-09,5;CL:0002028,8.86e-09,5;CL:0000453,3.44e-08,5;CL:0000791,4.70e-08,18;CL:0000789,4.70e-08,18;CL:0002420,4.70e-08,18;CL:0002419,4.70e-08,18;CL:0000790,4.70e-08,18;CL:0000624,4.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;8.13e-22;42!CL:0000790;4.94e-08;18!CL:0000049;8.21e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.41e-33!80;UBERON:0002390!1.05e-30!102;UBERON:0003061!1.05e-30!102;UBERON:0001474!9.89e-30!86;UBERON:0002193!8.72e-27!112;UBERON:0004765!6.66e-25!101;UBERON:0001434!6.66e-25!101;UBERON:0002405!1.32e-21!115;UBERON:0002384!7.14e-18!375;UBERON:0002204!5.67e-12!167;UBERON:0003081!2.18e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.76e-25,76;UBERON:0001474,4.92e-23,82;UBERON:0002390,5.71e-22,98;UBERON:0003061,5.71e-22,98;UBERON:0004765,1.70e-20,90;UBERON:0002405,1.17e-19,93;UBERON:0002193,2.22e-19,108;UBERON:0001434,6.81e-18,100;UBERON:0002384,1.42e-15,371;UBERON:0002204,1.55e-08,167;UBERON:0003081,1.42e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,8.65401409067589,3.0706351847777,7.58599004248772,0,0,0,0,0,0,8.86392653651004,11.6315779532682,9.11445657006578,0,0,0,0.145398238779565,0,0,1.62700325833979,0.411167888021826,2.47765096716083,0.863077176966451,0.512321413058201,0.709446689665756,5.5159308917859,5.16387746867061,5.41705946377367,0.188242339542605,0,0.674170453335254,5.20342617030534,7.06043859567406,8.31138263538754,0,0.199463657621632,0.426224750532694,2.03146467040009,3.97169657283798,8.09668923694247,0.251248665256743,0,1.3031330682307,0.605399502633369,4.78760926783834,6.96217252369946,0.633765858935825,1.91343869968539,2.72556239160889,0.22465726229299,0.600707571366025,0.64290234678832,0.285012743741249,0,0,0,0,0,0,0,0,0,0,10.2458334439701,5.87237189370939,8.41001101875504,1.32171328579026,6.1655941927969,0,9.63877873557782,12.1833336452241,5.96244347098577,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0.780356085359269,0,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0.506039384039006,0,0,0,0,0,0,0,0,11.4915843638097,12.5696892018248,4.92402973201517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8427332871888,45.8301451865937,13.634182810049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3387068977696,15.5251853898852,16.0428795349685,0,0,0,0,0,2.99602809578873,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,4.31428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,20.4726241311865,9.2856234546954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,0.664324201566815,0.490696182767533,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,8.65401409067589,3.0706351847777,7.58599004248772,0,0,0,0,0,0,8.86392653651004,11.6315779532682,9.11445657006578,0,0,0,0.145398238779565,0,0,1.62700325833979,0.411167888021826,2.47765096716083,0.863077176966451,0.512321413058201,0.709446689665756,5.5159308917859,5.16387746867061,5.41705946377367,0.188242339542605,0,0.674170453335254,5.20342617030534,7.06043859567406,8.31138263538754,0,0.199463657621632,0.426224750532694,2.03146467040009,3.97169657283798,8.09668923694247,0.251248665256743,0,1.3031330682307,0.605399502633369,4.78760926783834,6.96217252369946,0.633765858935825,1.91343869968539,2.72556239160889,0.22465726229299,0.600707571366025,0.64290234678832,0.285012743741249,0,0,0,0,0,0,0,0,0,0,10.2458334439701,5.87237189370939,8.41001101875504,1.32171328579026,6.1655941927969,0,9.63877873557782,12.1833336452241,5.96244347098577,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0.780356085359269,0,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0.506039384039006,0,0,0,0,0,0,0,0,11.4915843638097,12.5696892018248,4.92402973201517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.8427332871888,45.8301451865937,13.634182810049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3387068977696,15.5251853898852,16.0428795349685,0,0,0,0,0,2.99602809578873,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,4.31428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,20.4726241311865,9.2856234546954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,0.664324201566815,0.490696182767533,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr15:86127368..86127397,+ | |short_description=p@chr15:86127368..86127397,+ | ||
}} | }} |
Latest revision as of 05:08, 25 July 2015
Short description: | p@chr15:86127368..86127397, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:86127368..86127397, + |
Coexpression cluster: | C2353_Mast_immature_Natural_CD8_CD4_CD14_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.76e-25 | 76 |
bone element | 4.92e-23 | 82 |
hematopoietic system | 5.71e-22 | 98 |
blood island | 5.71e-22 | 98 |
skeletal element | 1.70e-20 | 90 |
immune system | 1.17e-19 | 93 |
hemolymphoid system | 2.22e-19 | 108 |
skeletal system | 6.81e-18 | 100 |
connective tissue | 1.42e-15 | 371 |
musculoskeletal system | 1.55e-08 | 167 |
lateral plate mesoderm | 1.42e-07 | 203 |