FFCP PHASE1:Hg19::chr15:81167393..81167394,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:81167393..81167394,+ | |||
|description=CAGE_peak_at_chr15:81167393..81167394,+ | |description=CAGE_peak_at_chr15:81167393..81167394,+ | ||
|id=chr15:81167393..81167394,+ | |id=chr15:81167393..81167394,+ | ||
|ontology_enrichment_celltype=CL:0000135;4.87e-14;3!CL:0000388;4.87e-14;3!CL:0002174;3.08e-11;1!CL:0000501;3.08e-11;1!CL:0000511;9.49e-11;1!CL:0002625;9.49e-11;1!CL:0000216;9.49e-11;1!CL:0002591;9.49e-11;1 | |ontology_enrichment_celltype=CL:0000057!4.40e-08!75;CL:0000135!5.61e-07!3;CL:0000386!5.61e-07!3;CL:0000388!5.61e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000135;4.87e-14;3!CL:0000388;4.87e-14;3!CL:0002174;3.08e-11;1!CL:0000501;3.08e-11;1!CL:0000511;9.49e-11;1!CL:0002625;9.49e-11;1!CL:0000216;9.49e-11;1!CL:0002591;9.49e-11;1 | ||
|ontology_enrichment_disease=DOID:3369;9.49e-11;1 | |ontology_enrichment_celltype_v019_2=CL:0000135,5.73e-14,3;CL:0000388,5.73e-14,3;CL:0002174,2.53e-11,1;CL:0000501,2.53e-11,1;CL:0000511,6.14e-11,1;CL:0002625,6.14e-11,1;CL:0000216,6.14e-11,1;CL:0002591,1.77e-10,1 | ||
|ontology_enrichment_uberon=UBERON:0007846;4.87e-14;3!UBERON:0000043;4.87e-14;3!UBERON:0007845;4.87e-14;3!UBERON:0002363;9.49e-11;1!UBERON:0002079;9.49e-11;1!UBERON:0002038;9.49e-11;1!UBERON:0001136;9.49e-11;1!UBERON:0001343;9.49e-11;1!UBERON:0009661;9.49e-11;1!UBERON:0002950;9.49e-11;1!UBERON:0004910;9.49e-11;1!UBERON:0004813;9.49e-11;1!UBERON:0001891;9.49e-11;1 | |ontology_enrichment_development_v019=UBERON:0010227;9.49e-11;1!UBERON:0010115;9.49e-11;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;9.49e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.98e-10!57;UBERON:0005068!4.98e-10!57;UBERON:0006241!4.98e-10!57;UBERON:0007135!4.98e-10!57;UBERON:0002616!1.68e-09!59;UBERON:0001893!6.45e-08!34;UBERON:0002020!7.38e-08!34;UBERON:0003528!7.38e-08!34;UBERON:0000073!1.50e-07!94;UBERON:0001016!1.50e-07!94;UBERON:0005743!1.63e-07!86;UBERON:0002619!1.76e-07!22;UBERON:0001017!2.13e-07!82;UBERON:0001869!2.73e-07!32;UBERON:0002791!3.92e-07!33;UBERON:0000955!4.02e-07!69;UBERON:0006238!4.02e-07!69;UBERON:0001950!4.43e-07!20;UBERON:0000043!5.61e-07!3;UBERON:0002346!5.95e-07!90;UBERON:0003075!6.47e-07!86;UBERON:0007284!6.47e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.87e-14;3!UBERON:0000043;4.87e-14;3!UBERON:0007845;4.87e-14;3!UBERON:0002363;9.49e-11;1!UBERON:0002079;9.49e-11;1!UBERON:0002038;9.49e-11;1!UBERON:0001136;9.49e-11;1!UBERON:0001343;9.49e-11;1!UBERON:0009661;9.49e-11;1!UBERON:0002950;9.49e-11;1!UBERON:0004910;9.49e-11;1!UBERON:0004813;9.49e-11;1!UBERON:0001891;9.49e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,5.73e-14,3;UBERON:0000043,5.73e-14,3;UBERON:0007845,5.73e-14,3;UBERON:0001136,6.14e-11,1;UBERON:0001343,6.14e-11,1;UBERON:0004910,6.14e-11,1;UBERON:0005154,6.14e-11,1;UBERON:0005295,6.14e-11,1;UBERON:0004813,6.14e-11,1;UBERON:0005297,6.14e-11,1;UBERON:0005294,6.14e-11,1;UBERON:0010141,6.14e-11,1;UBERON:0005891,6.14e-11,1;UBERON:0002363,6.77e-11,1;UBERON:0007645,6.77e-11,1;UBERON:0007647,6.77e-11,1;UBERON:0010115,6.77e-11,1;UBERON:0002079,8.22e-11,1;UBERON:0002038,1.61e-10,1;UBERON:0009661,1.61e-10,1;UBERON:0002950,1.61e-10,1;UBERON:0001891,1.61e-10,1;UBERON:0009616,1.61e-10,1;UBERON:0010286,1.61e-10,1 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,2.78059279707759,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0.717558542755448,0,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.368199594569197,0.80823028409406,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0.992431231275107,0.920771839728375,0,0.896974044789907,0,1.28683136914886,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,3.34942532423701,0.316379424718726,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.422215270595328,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0.552896299656123,0.886642856860642,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,1.20990716048664,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,3.86788897277961,0,0,0,0,0,0,0,0,0.720599767084807,0,0.315132729228895,0.164831716762333,0.26961417541674,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.250381861413,0,1.22021956690538,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,1.25783950876288,0,0,0.604923695052956,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.926089897295336,0,0,0,3.28926074368061,0,0.38582807654183,0,0,0,0,0.553033744606923,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.954013051960256,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.163771917510097,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0.596852325484105,0,0.45178432815584,0,0,0,0.218559560503957,0,0,0,1.17785080268967,0,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0,0.203974470572744,0,0,0.743990036333503,3.23522940041993,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.726713517082227,0.428201047781966,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,2.78059279707759,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.45071417671979,0,0.717558542755448,0,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.368199594569197,0.80823028409406,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0,0.781952530212746,0,0,0,0,0,0,0,0,0.992431231275107,0.920771839728375,0,0.896974044789907,0,1.28683136914886,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,3.34942532423701,0.316379424718726,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.422215270595328,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0.552896299656123,0.886642856860642,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,1.20990716048664,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0.137041924646751,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,3.86788897277961,0,0,0,0,0,0,0,0,0.720599767084807,0,0.315132729228895,0.164831716762333,0.26961417541674,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0.314108192500469,0,0.244052529803926,0.250381861413,0,1.22021956690538,0.18628920882415,0,0,0.151649117541648,0,0,0,0,0,0,0,0,1.25783950876288,0,0,0.604923695052956,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.926089897295336,0,0,0,3.28926074368061,0,0.38582807654183,0,0,0,0,0.553033744606923,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.954013051960256,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0.163771917510097,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0.596852325484105,0,0.45178432815584,0,0,0,0.218559560503957,0,0,0,1.17785080268967,0,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0,0.203974470572744,0,0,0.743990036333503,3.23522940041993,2.16313281061895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:81167393..81167394,+ | |short_description=p@chr15:81167393..81167394,+ | ||
}} | }} |
Latest revision as of 04:48, 25 July 2015
Short description: | p@chr15:81167393..81167394, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:81167393..81167394, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 5.73e-14 | 3 |
tendon cell | 5.73e-14 | 3 |
follicular cell of ovary | 2.53e-11 | 1 |
granulosa cell | 2.53e-11 | 1 |
androgen binding protein secreting cell | 6.14e-11 | 1 |
seminiferous tubule epithelial cell | 6.14e-11 | 1 |
Sertoli cell | 6.14e-11 | 1 |
smooth muscle cell of the pulmonary artery | 1.77e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 5.73e-14 | 3 |
tendon | 5.73e-14 | 3 |
regular connective tissue | 5.73e-14 | 3 |
mesothelium | 6.14e-11 | 1 |
seminiferous tubule of testis | 6.14e-11 | 1 |
epithelium of male gonad | 6.14e-11 | 1 |
epithelial cord | 6.14e-11 | 1 |
sex cord | 6.14e-11 | 1 |
seminiferous tubule epithelium | 6.14e-11 | 1 |
testis sex cord | 6.14e-11 | 1 |
genital ridge | 6.14e-11 | 1 |
primitive sex cord of indifferent gonad | 6.14e-11 | 1 |
coelomic epithelium | 6.14e-11 | 1 |
dura mater | 6.77e-11 | 1 |
future meninx | 6.77e-11 | 1 |
ectomeninx | 6.77e-11 | 1 |
future dura mater | 6.77e-11 | 1 |
left cardiac atrium | 8.22e-11 | 1 |
substantia nigra | 1.61e-10 | 1 |
midbrain nucleus | 1.61e-10 | 1 |
regional part of midbrain | 1.61e-10 | 1 |
midbrain | 1.61e-10 | 1 |
presumptive midbrain | 1.61e-10 | 1 |
midbrain neural tube | 1.61e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.05e-11 | 1 |