FFCP PHASE1:Hg19::chr15:74469049..74469070,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:74469049..74469070,+ | |||
|description=CAGE_peak_at_chr15:74469049..74469070,+ | |description=CAGE_peak_at_chr15:74469049..74469070,+ | ||
|id=chr15:74469049..74469070,+ | |id=chr15:74469049..74469070,+ | ||
|ontology_enrichment_celltype=CL:0000057!3.58e-19!75;CL:0002334!2.39e-18!12;CL:0000055!6.76e-12!180;CL:0002620!1.56e-10!23;CL:0000499!1.72e-08!27;CL:0002320!3.94e-07!365;CL:0000153!4.69e-07!9;CL:0000447!4.69e-07!9;CL:1000306!4.97e-07!4;CL:0002547!4.97e-07!4 | |ontology_enrichment_celltype=CL:0000057!3.58e-19!75;CL:0002334!2.39e-18!12;CL:0000055!6.76e-12!180;CL:0002620!1.56e-10!23;CL:0000499!1.72e-08!27;CL:0002320!3.94e-07!365;CL:0000153!4.69e-07!9;CL:0000447!4.69e-07!9;CL:1000306!4.97e-07!4;CL:0002547!4.97e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002334;7.10e-15;12!CL:0000153;1.20e-14;9!CL:0000447;1.20e-14;9!CL:0002575;3.82e-11;2!CL:0000327;1.11e-08;15!CL:0000138;2.12e-08;6!CL:0000214;2.91e-08;3!CL:0002620;7.42e-08;23!CL:0002579;1.04e-07;3!CL:0002591;9.38e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,7.61e-15,12;CL:0000153,1.42e-14,9;CL:0000447,1.42e-14,9;CL:0000057,5.25e-14,76;CL:0002575,2.81e-11,2;CL:0000327,1.22e-08,15;CL:0000058,2.35e-08,6;CL:0000138,2.35e-08,6;CL:0000214,3.08e-08,3;CL:0002620,6.90e-08,23;CL:0002579,9.72e-08,3;CL:0002320,2.08e-07,361;CL:0002591,9.67e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!2.37e-08!14;UBERON:0002199!3.51e-08!45;UBERON:0002416!3.51e-08!45;UBERON:0002384!3.05e-07!375;UBERON:0000415!4.97e-07!4;UBERON:0007240!4.97e-07!4;UBERON:0005742!4.97e-07!4;UBERON:0005734!4.97e-07!4;UBERON:0004664!4.97e-07!4;UBERON:0004663!4.97e-07!4 | |ontology_enrichment_uberon=UBERON:0001013!2.37e-08!14;UBERON:0002199!3.51e-08!45;UBERON:0002416!3.51e-08!45;UBERON:0002384!3.05e-07!375;UBERON:0000415!4.97e-07!4;UBERON:0007240!4.97e-07!4;UBERON:0005742!4.97e-07!4;UBERON:0005734!4.97e-07!4;UBERON:0004664!4.97e-07!4;UBERON:0004663!4.97e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.45e-09;9!UBERON:0000042;1.45e-09;9!UBERON:0006915;2.91e-08;3!UBERON:0007616;2.91e-08;3!UBERON:0002217;2.91e-08;3!UBERON:0002018;2.91e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.08e-08,3;UBERON:0007616,3.08e-08,3;UBERON:0002217,3.08e-08,3;UBERON:0002018,3.08e-08,3;UBERON:0004457,3.44e-07,12;UBERON:0000042,3.44e-07,12;UBERON:0002384,4.90e-07,371 | |||
|phase1_expression=1.45342703416445,0.428201047781966,0.563817616383885,0,0,0.872338524100369,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,3.33146993609895,1.5905718941022,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,4.30254931123221,1.41867352879343,0.560677600142307,0,0,0,0,0,0.302714855289863,1.15235184896,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,3.58779271377724,0.213557388818567,0,3.90118424909723,0.103052529238439,3.60696756063881,0.930584281657949,1.85653965465393,0.487185025805993,1.00973509697646,0.276149695926898,0.161646056818812,3.55009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0.797814349754612,2.08014873822732,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,1.17480694477644,1.71571711905428,0,0,0,0,0,0.30239029332968,0.992431231275107,1.38115775959256,0.841980283299221,1.15325234330131,0.511707249066704,1.60853921143608,1.48418066444991,0.462629081407967,2.66342587969691,0.246381468041427,1.03850885836724,0.232420756919918,0,0,0,0.459257792658427,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,1.39453664789186,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,1.116475108079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0,2.26016233240486,1.65409603063837,0,0,0,0,0,0,0,0,0,0,0,2.32218398827431,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,0.467426619694449,0.554805861502613,0,1.0062716070103,0,0.228840068396924,0.151230923763239,1.5543720058278,0,0,0,0.465788870628778,0.414706207840855,0.53168342911599,0,0.300515217994437,0,0,0,0.107410557042488,0,0.398095888698616,0,1.71697852591396,3.03074539889327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.464965701472501,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.714193294391221,0,0,0.224263725161227,0.0636471582781649,1.21270313374932,0.217716747896961,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=1.45342703416445,0.428201047781966,0.563817616383885,0,0,0.872338524100369,0,0,0.783556884599516,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,3.33146993609895,1.5905718941022,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,4.30254931123221,1.41867352879343,0.560677600142307,0,0,0,0,0,0.302714855289863,1.15235184896,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,3.58779271377724,0.213557388818567,0,3.90118424909723,0.103052529238439,3.60696756063881,0.930584281657949,1.85653965465393,0.487185025805993,1.00973509697646,0.276149695926898,0.161646056818812,3.55009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.07333828582095,0,0,0,0.797814349754612,2.08014873822732,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,1.17480694477644,1.71571711905428,0,0,0,0,0,0.30239029332968,0.992431231275107,1.38115775959256,0.841980283299221,1.15325234330131,0.511707249066704,1.60853921143608,1.48418066444991,0.462629081407967,2.66342587969691,0.246381468041427,1.03850885836724,0.232420756919918,0,0,0,0.459257792658427,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,1.39453664789186,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,1.116475108079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0,2.26016233240486,1.65409603063837,0,0,0,0,0,0,0,0,0,0,0,2.32218398827431,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,0.467426619694449,0.554805861502613,0,1.0062716070103,0,0.228840068396924,0.151230923763239,1.5543720058278,0,0,0,0.465788870628778,0.414706207840855,0.53168342911599,0,0.300515217994437,0,0,0,0.107410557042488,0,0.398095888698616,0,1.71697852591396,3.03074539889327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.464965701472501,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,1.11598505450025,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.714193294391221,0,0,0.224263725161227,0.0636471582781649,1.21270313374932,0.217716747896961,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr15:74469049..74469070,+ | |short_description=p@chr15:74469049..74469070,+ | ||
}} | }} |
Latest revision as of 04:09, 25 July 2015
Short description: | p@chr15:74469049..74469070, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:74469049..74469070, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 7.61e-15 | 12 |
GAG secreting cell | 1.42e-14 | 9 |
carbohydrate secreting cell | 1.42e-14 | 9 |
fibroblast | 5.25e-14 | 76 |
central nervous system pericyte | 2.81e-11 | 2 |
extracellular matrix secreting cell | 1.22e-08 | 15 |
chondroblast | 2.35e-08 | 6 |
chondrocyte | 2.35e-08 | 6 |
synovial cell | 3.08e-08 | 3 |
skin fibroblast | 6.90e-08 | 23 |
omentum preadipocyte | 9.72e-08 | 3 |
connective tissue cell | 2.08e-07 | 361 |
smooth muscle cell of the pulmonary artery | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.08e-08 | 3 |
layer of synovial tissue | 3.08e-08 | 3 |
synovial joint | 3.08e-08 | 3 |
synovial membrane of synovial joint | 3.08e-08 | 3 |
cavity lining | 3.44e-07 | 12 |
serous membrane | 3.44e-07 | 12 |
connective tissue | 4.90e-07 | 371 |