FFCP PHASE1:Hg19::chr15:74468492..74468517,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:74468492..74468517,+ | |||
|coexpression_cluster_id=C1410 | |||
|description=CAGE_peak_at_chr15:74468492..74468517,+ | |||
|id=chr15:74468492..74468517,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.88e-14!75;CL:0000055!3.29e-14!180;CL:0002334!1.77e-11!12;CL:0002620!3.06e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.81e-18;12!CL:0000153;7.12e-10;9!CL:0000447;7.12e-10;9!CL:1000306;2.21e-08;4!CL:0002547;2.21e-08;4!CL:0002575;2.51e-08;2!CL:0002583;5.11e-08;2!CL:0002570;5.11e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,8.05e-18,12;CL:0000057,1.26e-16,76;CL:0002320,6.86e-10,361;CL:0000153,8.45e-10,9;CL:0000447,8.45e-10,9;CL:1000306,1.63e-08,4;CL:0002547,1.63e-08,4;CL:0002575,3.29e-08,2;CL:0000134,3.54e-08,354;CL:0002583,7.39e-08,2;CL:0000048,2.08e-07,427;CL:0000723,3.66e-07,433;CL:0002570,5.04e-07,8;CL:0000034,7.61e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000479!8.32e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.14e-14;9!UBERON:0000042;6.14e-14;9!UBERON:0003688;1.24e-09;6!UBERON:0002358;1.24e-09;6!UBERON:0003684;1.24e-09;6!UBERON:0001178;1.24e-09;6!UBERON:0005406;8.40e-09;2!UBERON:0001013;1.29e-08;14!UBERON:0004797;2.21e-08;4!UBERON:0000415;2.21e-08;4!UBERON:0007240;2.21e-08;4!UBERON:0005742;2.21e-08;4!UBERON:0005734;2.21e-08;4!UBERON:0004664;2.21e-08;4!UBERON:0004663;2.21e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,2.51e-10,12;UBERON:0000042,2.51e-10,12;UBERON:0003688,1.14e-09,6;UBERON:0002358,1.14e-09,6;UBERON:0003684,1.14e-09,6;UBERON:0001178,1.14e-09,6;UBERON:0002384,2.41e-09,371;UBERON:0005406,8.26e-09,2;UBERON:0001013,1.26e-08,14;UBERON:0000415,1.63e-08,4;UBERON:0007240,1.63e-08,4;UBERON:0005742,1.63e-08,4;UBERON:0005734,1.63e-08,4;UBERON:0004664,1.63e-08,4;UBERON:0004663,1.63e-08,4 | |||
|phase1_expression=0.54503513781167,0,0.986680828671798,2.00146596706261,2.23480547213644,6.97870819280295,0,0,0,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.1686349143074,1.00267582127178,4.63508860674636,0,0.973269740605272,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39293562831038,0.662045904066094,10.8997915884549,1.77334191099179,1.12135520028461,0,0,0,0.134710672069688,0,0.605429710579726,2.30470369792,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,1.79389635688862,0.640672166455702,0,1.20036438433761,1.33968288009971,1.8034837803194,1.11670113798954,2.53164498361899,0.974370051611986,0.757301322732344,0.552299391853796,0.969876340912871,4.61512470271599,0.302256294682921,0.169560592310488,0,0,0,0,0,0,0,0,0,0,7.07565032012174,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.66004457238855,0,0,0,1.32969058292435,3.12022310734098,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0,0,0.178428988797162,0,0,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,4.11182430671755,2.05886054286514,0,0,0,0,0,0,2.23297027036899,0.153461973288062,3.08726103876381,2.69092213436972,0,2.41280881715411,7.42090332224955,1.07946785661859,4.08391968220192,0.574890092096664,0.519254429183621,1.85936605535935,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,4.82051789532479,0.580024309752732,0.462145851343933,0,0,0.107420244868274,0.435050081742686,0.0852266274161009,0.979352392114111,0,0,0,0,0.464845549297286,3.1481234683064,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.974853958525138,2.11300293513511,0.818999468447914,0.707027159768564,3.39024349860728,0.551365343546124,1.32687795048244,0.876901770507525,0,0,0,0,0.281695602532241,0,0,0,0,3.79993743535795,5.59801318031833,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,1.07730361905316,0,0,0,0,0.31900115973192,4.1218917030838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62899880526114,0,1.63293680054705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,1.49254802886874,0.701139929541673,1.10961172300523,0,0.251567901752575,0.889811221596536,0.457680136793847,2.26846385644859,2.33155800874171,0.147855149989634,0.159296767163702,0.449803112163605,0.310525913752519,1.24411862352257,0.265841714557995,2.08698024724694,0,0.380805212168795,0,0,0.107410557042488,0.928067519756987,0.796191777397232,0,3.09056134664514,2.35724642136143,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.795664888465099,0.977734268540344,0,0,0,0,0,0,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,1.48863353516788,0,0,0,0.336283722218824,0.606965604236632,0,0.532214220975833,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0.285906176706625,0,0.464965701472501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.971421986118279,0,0,0,0,0,0,0.308696632431779,0,0,0.735444965261716,0,0,0,0.8453114551668,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,3.34795516350076,5.54610754357702,0.865253124247578,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,0.224263725161227,0.190941474834495,0.404234377916439,0.435433495793923,1.36893320434112,0,0.215166616178029,0.332660356546013,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.805095174364105,0 | |||
|short_description=p@chr15:74468492..74468517,+ | |||
}} |
Latest revision as of 04:09, 25 July 2015
Short description: | p@chr15:74468492..74468517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:74468492..74468517, + |
Coexpression cluster: | C1410_Pericytes_Fibroblast_chorionic_Hair_Chondrocyte_Meningeal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 8.05e-18 | 12 |
fibroblast | 1.26e-16 | 76 |
connective tissue cell | 6.86e-10 | 361 |
GAG secreting cell | 8.45e-10 | 9 |
carbohydrate secreting cell | 8.45e-10 | 9 |
fibroblast of tunica adventitia of artery | 1.63e-08 | 4 |
fibroblast of the aortic adventitia | 1.63e-08 | 4 |
central nervous system pericyte | 3.29e-08 | 2 |
mesenchymal cell | 3.54e-08 | 354 |
subcutaneous preadipocyte | 7.39e-08 | 2 |
multi fate stem cell | 2.08e-07 | 427 |
somatic stem cell | 3.66e-07 | 433 |
mesenchymal stem cell of adipose | 5.04e-07 | 8 |
stem cell | 7.61e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 2.51e-10 | 12 |
serous membrane | 2.51e-10 | 12 |
omentum | 1.14e-09 | 6 |
peritoneum | 1.14e-09 | 6 |
abdominal cavity | 1.14e-09 | 6 |
visceral peritoneum | 1.14e-09 | 6 |
connective tissue | 2.41e-09 | 371 |
perirenal fat | 8.26e-09 | 2 |
adipose tissue | 1.26e-08 | 14 |
artery wall | 1.63e-08 | 4 |
tunica adventitia of artery | 1.63e-08 | 4 |
adventitia | 1.63e-08 | 4 |
tunica adventitia of blood vessel | 1.63e-08 | 4 |
aorta tunica adventitia | 1.63e-08 | 4 |
aorta wall | 1.63e-08 | 4 |