FFCP PHASE1:Hg19::chr15:74219788..74219809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:74219788..74219809,+ | |||
|coexpression_cluster_id=C315 | |coexpression_cluster_id=C315 | ||
|description=CAGE_peak_at_chr15:74219788..74219809,+ | |description=CAGE_peak_at_chr15:74219788..74219809,+ | ||
|id=chr15:74219788..74219809,+ | |id=chr15:74219788..74219809,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.04e-44!180;CL:0000057!1.22e-25!75;CL:0000680!2.31e-16!57;CL:0000056!2.31e-16!57;CL:0000355!2.31e-16!57;CL:0000187!6.18e-15!54;CL:0000183!1.49e-14!59;CL:0000393!3.38e-13!60;CL:0000211!3.38e-13!60;CL:0000192!9.78e-13!42;CL:0000514!9.78e-13!42;CL:0002371!5.46e-12!591;CL:0000359!5.98e-12!32;CL:0000144!2.30e-11!625;CL:0000048!3.28e-09!430;CL:0000723!3.37e-09!436;CL:0000548!3.50e-09!679;CL:0000004!3.50e-09!679;CL:0000255!3.50e-09!679;CL:0000012!8.67e-09!682;CL:0000034!1.31e-08!444;CL:0002620!5.81e-08!23;CL:0002334!1.36e-07!12 | |ontology_enrichment_celltype=CL:0000055!8.04e-44!180;CL:0000057!1.22e-25!75;CL:0000680!2.31e-16!57;CL:0000056!2.31e-16!57;CL:0000355!2.31e-16!57;CL:0000187!6.18e-15!54;CL:0000183!1.49e-14!59;CL:0000393!3.38e-13!60;CL:0000211!3.38e-13!60;CL:0000192!9.78e-13!42;CL:0000514!9.78e-13!42;CL:0002371!5.46e-12!591;CL:0000359!5.98e-12!32;CL:0000144!2.30e-11!625;CL:0000048!3.28e-09!430;CL:0000723!3.37e-09!436;CL:0000548!3.50e-09!679;CL:0000004!3.50e-09!679;CL:0000255!3.50e-09!679;CL:0000012!8.67e-09!682;CL:0000034!1.31e-08!444;CL:0002620!5.81e-08!23;CL:0002334!1.36e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.60e-09;32!CL:0000057;1.08e-07;73!CL:0002620;1.93e-07;23!CL:0002334;2.65e-07;12!CL:0000192;2.85e-07;43!CL:0002320;6.07e-07;188!CL:0002540;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.34e-20,76;CL:0000048,6.07e-15,427;CL:0000723,2.21e-14,433;CL:0000034,1.17e-13,441;CL:0002320,1.20e-11,361;CL:0000359,3.78e-10,32;CL:0000134,6.16e-09,354;CL:0000192,1.54e-08,43;CL:0000514,1.54e-08,43;CL:0002620,1.25e-07,23;CL:0000680,1.36e-07,58;CL:0000056,1.36e-07,58;CL:0000355,1.36e-07,58;CL:0000187,2.31e-07,55;CL:0002334,4.26e-07,12;CL:0000219,4.90e-07,386;CL:0000136,6.97e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.85e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.03e-18!83;UBERON:0002329!1.03e-18!83;UBERON:0003077!1.03e-18!83;UBERON:0003059!1.03e-18!83;UBERON:0007282!1.03e-18!83;UBERON:0009618!1.03e-18!83;UBERON:0007285!1.03e-18!83;UBERON:0004290!3.67e-17!70;UBERON:0002385!1.41e-15!63;UBERON:0001015!1.41e-15!63;UBERON:0000383!1.41e-15!63;UBERON:0001134!4.18e-15!61;UBERON:0002036!4.18e-15!61;UBERON:0003082!4.18e-15!61;UBERON:0000486!8.62e-15!82;UBERON:0003102!8.05e-12!95;UBERON:0005256!1.52e-11!143;UBERON:0002199!6.78e-10!45;UBERON:0002416!6.78e-10!45;UBERON:0000475!1.48e-09!365;UBERON:0001637!4.59e-08!42;UBERON:0003509!4.59e-08!42;UBERON:0004572!4.59e-08!42;UBERON:0002100!4.81e-08!216;UBERON:0002097!1.11e-07!40;UBERON:0004573!2.45e-07!33;UBERON:0004571!2.45e-07!33;UBERON:0004872!4.77e-07!84 | |ontology_enrichment_uberon=UBERON:0000914!1.03e-18!83;UBERON:0002329!1.03e-18!83;UBERON:0003077!1.03e-18!83;UBERON:0003059!1.03e-18!83;UBERON:0007282!1.03e-18!83;UBERON:0009618!1.03e-18!83;UBERON:0007285!1.03e-18!83;UBERON:0004290!3.67e-17!70;UBERON:0002385!1.41e-15!63;UBERON:0001015!1.41e-15!63;UBERON:0000383!1.41e-15!63;UBERON:0001134!4.18e-15!61;UBERON:0002036!4.18e-15!61;UBERON:0003082!4.18e-15!61;UBERON:0000486!8.62e-15!82;UBERON:0003102!8.05e-12!95;UBERON:0005256!1.52e-11!143;UBERON:0002199!6.78e-10!45;UBERON:0002416!6.78e-10!45;UBERON:0000475!1.48e-09!365;UBERON:0001637!4.59e-08!42;UBERON:0003509!4.59e-08!42;UBERON:0004572!4.59e-08!42;UBERON:0002100!4.81e-08!216;UBERON:0002097!1.11e-07!40;UBERON:0004573!2.45e-07!33;UBERON:0004571!2.45e-07!33;UBERON:0004872!4.77e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.46e-08;198!UBERON:0004457;6.54e-08;9!UBERON:0000042;6.54e-08;9!UBERON:0004573;8.79e-08;33!UBERON:0004571;8.79e-08;33!UBERON:0001013;1.22e-07;14!UBERON:0004905;4.87e-07;8!UBERON:0000982;4.87e-07;8!UBERON:0004770;4.87e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.27e-12,371;UBERON:0001637,4.38e-09,42;UBERON:0003509,4.38e-09,42;UBERON:0004572,4.38e-09,42;UBERON:0007524,1.02e-08,73;UBERON:0004573,1.26e-08,33;UBERON:0004571,1.26e-08,33;UBERON:0002329,2.22e-08,71;UBERON:0003059,2.22e-08,71;UBERON:0007282,2.22e-08,71;UBERON:0004290,2.22e-08,71;UBERON:0009618,2.22e-08,71;UBERON:0002199,2.75e-08,46;UBERON:0002416,2.75e-08,46;UBERON:0003077,3.56e-08,72;UBERON:0007285,3.56e-08,72;UBERON:0000486,8.02e-08,83;UBERON:0001013,1.45e-07,14;UBERON:0001134,1.62e-07,62;UBERON:0002036,1.62e-07,62;UBERON:0003082,1.62e-07,62;UBERON:0004905,2.74e-07,8;UBERON:0000982,2.74e-07,8;UBERON:0004770,2.74e-07,8;UBERON:0002385,4.13e-07,64;UBERON:0001015,4.13e-07,64;UBERON:0000383,4.13e-07,64;UBERON:0007503,4.63e-07,78 | |||
|phase1_expression=1.45342703416445,1.71280419112787,0.422863212287913,1.0007329835313,1.78784437770915,1.74467704820074,2.53299878168311,1.26343974685366,0.783556884599516,0,0,0.218441372130172,0,0.866364470720326,1.65698687863958,3.36162573225888,0.602694528023977,0.730310090387373,0.487932798790507,0.738726348460727,0.612002073732759,2.19418305034661,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0.255725123687061,0.722878304769133,2.00535164254356,1.59331170856906,0,0.973269740605272,0.283604451492204,0.221729397462564,0.702678285545008,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,2.02608818663328,0.794455084879313,4.30254931123221,2.12801029319014,1.68203280042692,1.06748995729705,1.2333377420858,0.311211035399766,0.269421344139376,0.163461903113459,0.605429710579726,1.15235184896,0.234321431833797,0.936480230490962,0,0.896692083310806,0.587172493218824,0.161872944368132,0,0.408308342509787,0.61417158655884,0.413303124703062,2.37600571456411,1.23633464639278,0.910161361938026,2.15585442544872,0.336672227908132,0.750711119231785,0,1.31693286264251,1.22595118319608,1.20190447125277,0.113432183160021,1.4351170855109,1.92201649936711,1.69545520927649,1.20036438433761,0.824420233907511,0.772921620136887,1.67505170698431,1.0126579934476,1.85130309806277,0,1.84099797284599,2.58633690910099,2.13005755509969,1.10827308050404,1.18692414617341,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,3.12899064659632,5.14592750554308,1.38134921352481,3.25057549622385,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.517086863031111,0,1.690605505112,0,0,0.514414748524284,1.41849132023278,1.0656887160644,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,1.19812427745791,1.14861935834114,0,0.868687840005475,1.64381058040307,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,2.07207756718018,1.10422342547226,2.00068208423871,1.62759014219841,1.87173775377726,1.78428988797162,1.73472656537328,1.52283839490527,4.8151375956435,29.562975527278,8.27784570340039,2.65690239414175,1.29058417979192,1.39013783148933,3.91602314925481,2.40200396667599,0,0.215714200818617,0,0.303127571446259,0,0.30239029332968,2.23297027036899,0.61384789315225,1.68396056659844,1.28139149255701,1.02341449813341,1.28683136914886,1.48418066444991,0.616838775210622,1.59805552781814,0.739144404124282,1.03850885836724,0.581051892299796,0.241718899183244,1.20303882181971,0.0920809889358963,0.34444334449382,0.728364672026868,1.04899531967539,0,0.0770153371044148,1.56869953835371,0,0.316654886678627,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.984043937099117,0,0,0,0,0,0.650060246036521,6.42735719376638,1.16004861950546,0.770243085573222,0.460511024178389,0.137836572484531,0.644521469209642,0.870100163485371,0.340906509664404,0.623224249527161,0.165284915360978,0,0,0,1.85938219718914,3.77774816196768,1.3940745403212,0.308033580176089,0.532306030317022,2.60979897622522,2.03856641014312,1.14499909393593,0.372158369359667,1.89827654831236,0.38126038784765,2.04718233049067,0.42793898803392,2.54562598340749,1.56989728039846,0,0.54907405947211,0.235624804691373,1.41527737101321,0,0,0.975267478179181,0.731140468893853,0,0.545999645631943,0.707027159768564,3.39024349860728,0,1.99031692572366,2.63070531152258,0,1.31178950409327,0.202910376962704,1.8589409885985,0.845086807596724,0.286822704408103,0.196498082026242,1.07001315444375,0,2.53329162357197,1.97576935775941,0,0.349934720244983,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,1.22439575525196,0,0,0.398495976502139,0,0.251932747854276,0.102268682502155,0,0.933118762985422,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0.0882561266915003,0,0,0,0.0633107959558787,0,0.08015882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| ||
|short_description=p@chr15:74219788..74219809,+ | |short_description=p@chr15:74219788..74219809,+ | ||
}} | }} |
Latest revision as of 04:06, 25 July 2015
Short description: | p@chr15:74219788..74219809, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:74219788..74219809, + |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.34e-20 | 76 |
multi fate stem cell | 6.07e-15 | 427 |
somatic stem cell | 2.21e-14 | 433 |
stem cell | 1.17e-13 | 441 |
connective tissue cell | 1.20e-11 | 361 |
vascular associated smooth muscle cell | 3.78e-10 | 32 |
mesenchymal cell | 6.16e-09 | 354 |
smooth muscle cell | 1.54e-08 | 43 |
smooth muscle myoblast | 1.54e-08 | 43 |
skin fibroblast | 1.25e-07 | 23 |
muscle precursor cell | 1.36e-07 | 58 |
myoblast | 1.36e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-07 | 58 |
muscle cell | 2.31e-07 | 55 |
preadipocyte | 4.26e-07 | 12 |
motile cell | 4.90e-07 | 386 |
fat cell | 6.97e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.27e-12 | 371 |
artery | 4.38e-09 | 42 |
arterial blood vessel | 4.38e-09 | 42 |
arterial system | 4.38e-09 | 42 |
dense mesenchyme tissue | 1.02e-08 | 73 |
systemic artery | 1.26e-08 | 33 |
systemic arterial system | 1.26e-08 | 33 |
somite | 2.22e-08 | 71 |
presomitic mesoderm | 2.22e-08 | 71 |
presumptive segmental plate | 2.22e-08 | 71 |
dermomyotome | 2.22e-08 | 71 |
trunk paraxial mesoderm | 2.22e-08 | 71 |
integument | 2.75e-08 | 46 |
integumental system | 2.75e-08 | 46 |
paraxial mesoderm | 3.56e-08 | 72 |
presumptive paraxial mesoderm | 3.56e-08 | 72 |
multilaminar epithelium | 8.02e-08 | 83 |
adipose tissue | 1.45e-07 | 14 |
skeletal muscle tissue | 1.62e-07 | 62 |
striated muscle tissue | 1.62e-07 | 62 |
myotome | 1.62e-07 | 62 |
articulation | 2.74e-07 | 8 |
skeletal joint | 2.74e-07 | 8 |
articular system | 2.74e-07 | 8 |
muscle tissue | 4.13e-07 | 64 |
musculature | 4.13e-07 | 64 |
musculature of body | 4.13e-07 | 64 |
epithelial vesicle | 4.63e-07 | 78 |