FFCP PHASE1:Hg19::chr15:70960393..70960405,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:70960393..70960405,-
|short_description=p@chr15:70960393..70960405,-
|description=CAGE_peak_at_chr15:70960393..70960405,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:70960393..70960405,- | |||
|description=CAGE_peak_at_chr15:70960393..70960405,- | |||
|id=chr15:70960393..70960405,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002569;3.11e-11;6!CL:0002601;1.90e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,1.93e-11,6;CL:0002601,2.84e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;7.83e-09;1!DOID:4235;1.90e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,8.15e-09,1;DOID:4235,3.79e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003101!3.85e-07!22;UBERON:0000079!3.85e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;3.11e-11;6!UBERON:0003104;1.06e-09;7!UBERON:0009142;1.06e-09;7!UBERON:0002331;6.27e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,1.93e-11,6;UBERON:0002331,4.75e-07,10;UBERON:0000358,4.75e-07,10;UBERON:0000307,4.75e-07,10;UBERON:0000091,4.75e-07,10;UBERON:0000087,4.75e-07,10;UBERON:0007010,4.75e-07,10;UBERON:0007806,4.75e-07,10;UBERON:0008780,4.75e-07,10;UBERON:0005728,4.75e-07,10 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,1.20538905604795,0,0.487932798790507,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.189069634328136,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0,2.48485975847659,0.379891534993739,0.132409180813219,0.286836620748814,1.77334191099179,0,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0.151357427644931,1.15235184896,0,0,0,1.19558944441441,0,0,0,0.204154171254893,1.10550885580591,0,0,0.494533858557114,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0.900273288253207,0.206105058476878,0.772921620136887,0.37223371266318,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0,0,0.67824236924195,0.193260853163297,0,0,0,0.132529768321485,0.232387885739037,0,0,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,4.3299402607582,0,0.117408694235822,0,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0.5867062865676,0.517086863031111,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,1.58390374586686,0,0,0.799783929456456,0,0,0,1.67737398844108,1.14861935834114,0,0.289562613335158,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,0.892144943985809,0.157702415033935,0.819989904948992,0.300946099727719,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.841980283299221,0.128139149255701,0,3.37793234401576,0,1.3878872442239,0.532685175939381,0.246381468041427,0,0.697262270759755,0.120859449591622,0.200506470303285,0.644566922551274,0.34444334449382,3.82391452814106,0.393373244878272,0,0.15403067420883,0,0,0.211103257785751,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.426133137080504,0.445160178233687,0,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.9554993798559,1.41405431953713,0,0,0,0,0,0,0,0,0,0,0,0,1.06428319221179,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0.667852230137435,0,0.211125408127993,0,0,0,0.613612095012929,0,0.311039587661807,0.179736702294654,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.472775363535873,0,0.583209226766509,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,1.19472429772959,0,0.693373365065693,0,0.0979923974143777,0,0.52418000472609,0.687944129886466,0.0967563312890851,0.146178634172371,0,0.193978032976839,0,0,0.137041924646751,0.596143835108969,0,0.195551382734803,0,0,0,0.288180834308212,0.458146384663663,0.343189995723929,0.288109595976299,0.248505071130865,0,0.135904206073614,0.104602846312333,0.611989305817931,0,0.600420288709789,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.26961417541674,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0.566560457600628,0.293104467356165,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0.570930667089935,0,0,0,0.447764408660622,0.233713309847224,0.554805861502613,0.189403005275089,0,0.889811221596536,0.228840068396924,0.756154618816195,0.466311601748341,0.147855149989634,0.159296767163702,0,0,3.31764966272684,0.797525143673985,1.04349012362347,0,0.380805212168795,0.813741466409323,0.545545977607678,0.429642228169954,0,2.78667122089031,0.400027764663154,0.686791410365586,0,0,0.385239660814607,0,0,0.226705925512272,1.389134845943,0,0.358177682162975,0,0,0.706756583783524,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0.163565394255844,0.982829546539238,0,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0.0981477185010256,0.11796972334774,0.366857197043358,0.346576998451015,0.381382095467167,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0,0,0.514464028312255,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0.116241425368125,0.173858272302579,0,0,0.51215543128185,0,0,0.473328002922261,0.170426809518315,0.423387050190929,0.22910686854405,0,0.955538938977433,0.223710863595585,0.098150233615243,0.121917924982269,0,0.205325613712494,0,0,0,0,0,0.11294608203896,0.109940516745429,0,0.231522474323834,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0,1.0195626881269,0,0,0.0999411559249289,0,0,0.561689566824178,0,0.458729283404541,0.286679166302903,0.473314686579554,0,0,0,0,0.924351257262837,1.73050624849516,0.126166424835079,0,0,0.815910637935854,0,0.459474497674225,1.50424523575425,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.224263725161227,0.12729431655633,0.808468755832877,0.870866991587845,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,1.20538905604795,0,0.487932798790507,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0.189069634328136,0.665188192387692,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.357198913136319,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0,2.48485975847659,0.379891534993739,0.132409180813219,0.286836620748814,1.77334191099179,0,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0.151357427644931,1.15235184896,0,0,0,1.19558944441441,0,0,0,0.204154171254893,1.10550885580591,0,0,0.494533858557114,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0.900273288253207,0.206105058476878,0.772921620136887,0.37223371266318,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0,0,0.67824236924195,0.193260853163297,0,0,0,0.132529768321485,0.232387885739037,0,0,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.277765335475589,0,0,4.3299402607582,0,0.117408694235822,0,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0.5867062865676,0.517086863031111,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,1.58390374586686,0,0,0.799783929456456,0,0,0,1.67737398844108,1.14861935834114,0,0.289562613335158,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,0.892144943985809,0.157702415033935,0.819989904948992,0.300946099727719,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.841980283299221,0.128139149255701,0,3.37793234401576,0,1.3878872442239,0.532685175939381,0.246381468041427,0,0.697262270759755,0.120859449591622,0.200506470303285,0.644566922551274,0.34444334449382,3.82391452814106,0.393373244878272,0,0.15403067420883,0,0,0.211103257785751,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.426133137080504,0.445160178233687,0,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.9554993798559,1.41405431953713,0,0,0,0,0,0,0,0,0,0,0,0,1.06428319221179,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0.568272293612826,0.23874448473769,0,0.307160702099232,0,0,0.667852230137435,0,0.211125408127993,0,0,0,0.613612095012929,0,0.311039587661807,0.179736702294654,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.472775363535873,0,0.583209226766509,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0.153900517007594,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0.330991955875499,0,1.19472429772959,0,0.693373365065693,0,0.0979923974143777,0,0.52418000472609,0.687944129886466,0.0967563312890851,0.146178634172371,0,0.193978032976839,0,0,0.137041924646751,0.596143835108969,0,0.195551382734803,0,0,0,0.288180834308212,0.458146384663663,0.343189995723929,0.288109595976299,0.248505071130865,0,0.135904206073614,0.104602846312333,0.611989305817931,0,0.600420288709789,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.26961417541674,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0.566560457600628,0.293104467356165,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0,0,0.570930667089935,0,0,0,0.447764408660622,0.233713309847224,0.554805861502613,0.189403005275089,0,0.889811221596536,0.228840068396924,0.756154618816195,0.466311601748341,0.147855149989634,0.159296767163702,0,0,3.31764966272684,0.797525143673985,1.04349012362347,0,0.380805212168795,0.813741466409323,0.545545977607678,0.429642228169954,0,2.78667122089031,0.400027764663154,0.686791410365586,0,0,0.385239660814607,0,0,0.226705925512272,1.389134845943,0,0.358177682162975,0,0,0.706756583783524,0,0.168942440653073,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0.163565394255844,0.982829546539238,0,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0.0981477185010256,0.11796972334774,0.366857197043358,0.346576998451015,0.381382095467167,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0,0,0.514464028312255,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0.431855182437243,0,0,0,0.116241425368125,0.173858272302579,0,0,0.51215543128185,0,0,0.473328002922261,0.170426809518315,0.423387050190929,0.22910686854405,0,0.955538938977433,0.223710863595585,0.098150233615243,0.121917924982269,0,0.205325613712494,0,0,0,0,0,0.11294608203896,0.109940516745429,0,0.231522474323834,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0,0,1.0195626881269,0,0,0.0999411559249289,0,0,0.561689566824178,0,0.458729283404541,0.286679166302903,0.473314686579554,0,0,0,0,0.924351257262837,1.73050624849516,0.126166424835079,0,0,0.815910637935854,0,0.459474497674225,1.50424523575425,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.224263725161227,0.12729431655633,0.808468755832877,0.870866991587845,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr15:70960393..70960405,- | |||
}} | }} |
Latest revision as of 03:51, 25 July 2015
Short description: | p@chr15:70960393..70960405, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:70960393..70960405, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 1.93e-11 | 6 |
uterine smooth muscle cell | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 1.93e-11 | 6 |
umbilical cord | 4.75e-07 | 10 |
blastocyst | 4.75e-07 | 10 |
blastula | 4.75e-07 | 10 |
bilaminar disc | 4.75e-07 | 10 |
inner cell mass | 4.75e-07 | 10 |
cleaving embryo | 4.75e-07 | 10 |
connecting stalk | 4.75e-07 | 10 |
inner cell mass derived epiblast | 4.75e-07 | 10 |
extraembryonic mesoderm | 4.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 8.15e-09 | 1 |
spindle cell sarcoma | 3.79e-08 | 1 |