FFCP PHASE1:Hg19::chr15:68805160..68805175,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:68805160..68805175,+
|short_description=p@chr15:68805160..68805175,+
|description=CAGE_peak_at_chr15:68805160..68805175,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:68805160..68805175,+ | |||
|coexpression_cluster_id=C3507 | |||
|description=CAGE_peak_at_chr15:68805160..68805175,+ | |||
|id=chr15:68805160..68805175,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.18e-11!75;CL:0002620!6.74e-10!23;CL:0002334!1.31e-09!12;CL:0000136!3.54e-09!15;CL:0000055!8.96e-09!180;CL:0002580!9.68e-09!3;CL:0002579!1.15e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.75e-27;3!CL:0002579;2.73e-27;3!CL:0002334;2.50e-26;12!CL:0002617;7.55e-18;2!CL:0000136;2.76e-16;13!CL:0002615;2.25e-12;3!CL:0000222;1.80e-10;1!CL:0002569;8.27e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.75e-27,3;CL:0002579,3.26e-27,3;CL:0002334,2.73e-26,12;CL:0002617,6.93e-18,2;CL:0000136,4.14e-14,15;CL:0002615,2.52e-12,3;CL:0002569,8.39e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;2.97e-10;1!DOID:17;1.09e-07;5!DOID:450;1.09e-07;5!DOID:66;1.09e-07;5!DOID:423;1.09e-07;5!DOID:0080000;1.09e-07;5!DOID:11722;1.09e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,2.59e-10,1;DOID:17,1.13e-07,5;DOID:450,1.13e-07,5;DOID:66,1.13e-07,5;DOID:423,1.13e-07,5;DOID:0080000,1.13e-07,5;DOID:11722,1.13e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!7.80e-11!6;UBERON:0002358!7.80e-11!6;UBERON:0003684!7.80e-11!6;UBERON:0001178!7.80e-11!6;UBERON:0004457!4.18e-09!12;UBERON:0000042!4.18e-09!12;UBERON:0002199!9.71e-07!45;UBERON:0002416!9.71e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.74e-36;6!UBERON:0002358;2.74e-36;6!UBERON:0003684;2.74e-36;6!UBERON:0001178;2.74e-36;6!UBERON:0004457;3.39e-24;9!UBERON:0000042;3.39e-24;9!UBERON:0000310;9.36e-22;10!UBERON:0001443;8.99e-20;11!UBERON:0003422;8.27e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.67e-36,6;UBERON:0002358,3.67e-36,6;UBERON:0003684,3.67e-36,6;UBERON:0001178,3.67e-36,6;UBERON:0000310,8.97e-22,10;UBERON:0001443,8.65e-20,11;UBERON:0004457,4.50e-18,12;UBERON:0000042,4.50e-18,12;UBERON:0002384,5.80e-07,371;UBERON:0003422,8.39e-07,6 | |||
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| ||
|short_description=p@chr15:68805160..68805175,+ | |||
}} | }} |
Latest revision as of 03:43, 25 July 2015
Short description: | p@chr15:68805160..68805175, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68805160..68805175, + |
Coexpression cluster: | C3507_Preadipocyte_mesodermal_Multipotent_Ewing_Chondrocyte_Osteoblast_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.75e-27 | 3 |
omentum preadipocyte | 3.26e-27 | 3 |
preadipocyte | 2.73e-26 | 12 |
adipocyte of breast | 6.93e-18 | 2 |
fat cell | 4.14e-14 | 15 |
adipocyte of omentum tissue | 2.52e-12 | 3 |
mesenchymal stem cell of umbilical cord | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.67e-36 | 6 |
peritoneum | 3.67e-36 | 6 |
abdominal cavity | 3.67e-36 | 6 |
visceral peritoneum | 3.67e-36 | 6 |
breast | 8.97e-22 | 10 |
chest | 8.65e-20 | 11 |
cavity lining | 4.50e-18 | 12 |
serous membrane | 4.50e-18 | 12 |
connective tissue | 5.80e-07 | 371 |
mesenchyme of umbilical cord | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 2.59e-10 | 1 |
musculoskeletal system disease | 1.13e-07 | 5 |
myotonic disease | 1.13e-07 | 5 |
muscle tissue disease | 1.13e-07 | 5 |
myopathy | 1.13e-07 | 5 |
muscular disease | 1.13e-07 | 5 |
myotonic dystrophy | 1.13e-07 | 5 |