FFCP PHASE1:Hg19::chr15:68612587..68612601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:68612587..68612601,- | |||
|coexpression_cluster_id=C259 | |coexpression_cluster_id=C259 | ||
|description=CAGE_peak_at_chr15:68612587..68612601,- | |description=CAGE_peak_at_chr15:68612587..68612601,- | ||
|id=chr15:68612587..68612601,- | |id=chr15:68612587..68612601,- | ||
|ontology_enrichment_celltype=CL:0000055!1.04e-18!180;CL:0000057!8.07e-17!75;CL:0000048!1.32e-11!430;CL:0002334!1.83e-11!12;CL:0002320!3.47e-11!365;CL:0000723!3.93e-11!436;CL:0000134!1.16e-10!358;CL:0000034!1.61e-10!444;CL:0000219!6.05e-10!390;CL:0002620!7.38e-10!23;CL:0000153!8.26e-10!9;CL:0000447!8.26e-10!9;CL:0000499!9.84e-10!27;CL:0000136!5.33e-09!15;CL:0000327!7.14e-09!14;CL:0000667!5.09e-08!6;CL:0000058!5.09e-08!6;CL:0000138!5.09e-08!6;CL:0000062!4.11e-07!11;CL:0000375!4.11e-07!11;CL:0000335!4.11e-07!11;CL:0002371!5.34e-07!591;CL:0002580!5.84e-07!3;CL:0002579!6.42e-07!3;CL:0000135!8.35e-07!3;CL:0000386!8.35e-07!3;CL:0000388!8.35e-07!3 | |ontology_enrichment_celltype=CL:0000055!1.04e-18!180;CL:0000057!8.07e-17!75;CL:0000048!1.32e-11!430;CL:0002334!1.83e-11!12;CL:0002320!3.47e-11!365;CL:0000723!3.93e-11!436;CL:0000134!1.16e-10!358;CL:0000034!1.61e-10!444;CL:0000219!6.05e-10!390;CL:0002620!7.38e-10!23;CL:0000153!8.26e-10!9;CL:0000447!8.26e-10!9;CL:0000499!9.84e-10!27;CL:0000136!5.33e-09!15;CL:0000327!7.14e-09!14;CL:0000667!5.09e-08!6;CL:0000058!5.09e-08!6;CL:0000138!5.09e-08!6;CL:0000062!4.11e-07!11;CL:0000375!4.11e-07!11;CL:0000335!4.11e-07!11;CL:0002371!5.34e-07!591;CL:0002580!5.84e-07!3;CL:0002579!6.42e-07!3;CL:0000135!8.35e-07!3;CL:0000386!8.35e-07!3;CL:0000388!8.35e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.98e-22;12!CL:0002579;5.94e-18;3!CL:0002580;1.61e-17;3!CL:0000135;3.06e-17;3!CL:0000388;3.06e-17;3!CL:0000499;1.57e-11;28!CL:0000136;4.37e-11;13!CL:0000153;3.40e-10;9!CL:0000447;3.40e-10;9!CL:0000327;3.93e-09;15!CL:0000138;7.09e-09;6!CL:0002548;7.09e-09;6!CL:0002615;1.30e-08;3!CL:0002616;3.17e-07;1!CL:0002174;9.23e-07;1!CL:0002581;9.23e-07;1!CL:0000501;9.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.97e-22,12;CL:0000057,9.87e-20,76;CL:0002580,6.50e-18,3;CL:0002579,8.64e-18,3;CL:0000135,1.91e-17,3;CL:0000388,1.91e-17,3;CL:0000136,2.18e-13,15;CL:0000499,1.43e-11,28;CL:0000134,4.97e-11,354;CL:0002320,1.08e-10,361;CL:0000219,1.99e-10,386;CL:0000153,3.80e-10,9;CL:0000447,3.80e-10,9;CL:0000327,4.08e-09,15;CL:0002548,6.64e-09,6;CL:0000058,8.03e-09,6;CL:0000138,8.03e-09,6;CL:0002615,1.28e-08,3;CL:0000048,4.80e-08,427;CL:0000723,7.64e-08,433;CL:0000034,1.39e-07,441;CL:0002616,2.99e-07,1;CL:0002581,7.57e-07,1;CL:0000151,9.85e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.77e-09!5;DOID:450!8.77e-09!5;DOID:66!8.77e-09!5;DOID:423!8.77e-09!5;DOID:0080000!8.77e-09!5;DOID:11722!8.77e-09!5 | |ontology_enrichment_disease=DOID:17!8.77e-09!5;DOID:450!8.77e-09!5;DOID:66!8.77e-09!5;DOID:423!8.77e-09!5;DOID:0080000!8.77e-09!5;DOID:11722!8.77e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:3571;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,8.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!7.03e-12!6;UBERON:0002358!7.03e-12!6;UBERON:0003684!7.03e-12!6;UBERON:0001178!7.03e-12!6;UBERON:0002384!1.84e-11!375;UBERON:0004457!1.82e-09!12;UBERON:0000042!1.82e-09!12;UBERON:0002199!6.30e-09!45;UBERON:0002416!6.30e-09!45;UBERON:0002097!3.42e-07!40;UBERON:0000043!8.35e-07!3 | |ontology_enrichment_uberon=UBERON:0003688!7.03e-12!6;UBERON:0002358!7.03e-12!6;UBERON:0003684!7.03e-12!6;UBERON:0001178!7.03e-12!6;UBERON:0002384!1.84e-11!375;UBERON:0004457!1.82e-09!12;UBERON:0000042!1.82e-09!12;UBERON:0002199!6.30e-09!45;UBERON:0002416!6.30e-09!45;UBERON:0002097!3.42e-07!40;UBERON:0000043!8.35e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.32e-24;6!UBERON:0002358;7.32e-24;6!UBERON:0003684;7.32e-24;6!UBERON:0001178;7.32e-24;6!UBERON:0004457;1.31e-22;9!UBERON:0000042;1.31e-22;9!UBERON:0007846;3.06e-17;3!UBERON:0000043;3.06e-17;3!UBERON:0007845;3.06e-17;3!UBERON:0005406;2.56e-12;2!UBERON:0000310;2.54e-09;10!UBERON:0001443;1.76e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.76e-24,6;UBERON:0002358,9.76e-24,6;UBERON:0003684,9.76e-24,6;UBERON:0001178,9.76e-24,6;UBERON:0007846,1.91e-17,3;UBERON:0000043,1.91e-17,3;UBERON:0007845,1.91e-17,3;UBERON:0004457,9.53e-17,12;UBERON:0000042,9.53e-17,12;UBERON:0005406,1.98e-12,2;UBERON:0002384,3.12e-10,371;UBERON:0000310,1.79e-09,10;UBERON:0001443,1.29e-08,11 | |||
|phase1_expression=0.363356758541113,4.28201047781966,0.563817616383885,8.00586386825043,1.34088328328186,3.48935409640147,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,1.59331170856906,0.795285947051099,2.91980922181582,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0.573673241497627,0,1.68203280042692,1.06748995729705,2.96001058100592,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.45071417671979,0,0.179389635688862,1.2813443329114,0.423863802319124,1.20036438433761,0.515262646192195,1.28820270022815,0.930584281657949,0.337552664482532,0.68205903612839,0,0.184099797284599,0,1.06502877754984,0.906768884048762,0,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.178428988797162,0.630809660135739,0.35142424497814,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.368738337083406,0,0.783204629850962,0.343143423810856,0,0,0,0,0,0,1.73675465473144,1.84154367945675,7.01650236082684,1.02511319404561,3.58195074346692,6.11244900345709,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0.405820753925408,0,0,0,0,0,0,3.37772216476263,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.341826167541004,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0.467426619694449,0,0,0.754703705257725,0,0.457680136793847,0,0,0.147855149989634,0,0,0.155262956876259,0,0.797525143673985,0,0.450772826991655,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0.800055529326307,1.37358282073117,0.673498977531838,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,2.94848863961771,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,2.31087814315709,1.29787968637137,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr15:68612587..68612601,- | |short_description=p@chr15:68612587..68612601,- | ||
}} | }} |
Latest revision as of 03:42, 25 July 2015
Short description: | p@chr15:68612587..68612601, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:68612587..68612601, - |
Coexpression cluster: | C259_Preadipocyte_Adipocyte_Fibroblast_Chondrocyte_tenocyte_normal_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.97e-22 | 12 |
fibroblast | 9.87e-20 | 76 |
preadipocyte of the breast | 6.50e-18 | 3 |
omentum preadipocyte | 8.64e-18 | 3 |
fibrocyte | 1.91e-17 | 3 |
tendon cell | 1.91e-17 | 3 |
fat cell | 2.18e-13 | 15 |
stromal cell | 1.43e-11 | 28 |
mesenchymal cell | 4.97e-11 | 354 |
connective tissue cell | 1.08e-10 | 361 |
motile cell | 1.99e-10 | 386 |
GAG secreting cell | 3.80e-10 | 9 |
carbohydrate secreting cell | 3.80e-10 | 9 |
extracellular matrix secreting cell | 4.08e-09 | 15 |
cardiac fibroblast | 6.64e-09 | 6 |
chondroblast | 8.03e-09 | 6 |
chondrocyte | 8.03e-09 | 6 |
adipocyte of omentum tissue | 1.28e-08 | 3 |
multi fate stem cell | 4.80e-08 | 427 |
somatic stem cell | 7.64e-08 | 433 |
stem cell | 1.39e-07 | 441 |
perirenal adipocyte cell | 2.99e-07 | 1 |
perirenal preadipocyte | 7.57e-07 | 1 |
secretory cell | 9.85e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.76e-24 | 6 |
peritoneum | 9.76e-24 | 6 |
abdominal cavity | 9.76e-24 | 6 |
visceral peritoneum | 9.76e-24 | 6 |
dense regular connective tissue | 1.91e-17 | 3 |
tendon | 1.91e-17 | 3 |
regular connective tissue | 1.91e-17 | 3 |
cavity lining | 9.53e-17 | 12 |
serous membrane | 9.53e-17 | 12 |
perirenal fat | 1.98e-12 | 2 |
connective tissue | 3.12e-10 | 371 |
breast | 1.79e-09 | 10 |
chest | 1.29e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.02e-07 | 1 |