FFCP PHASE1:Hg19::chr15:65823105..65823143,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:65823105..65823143,+
|short_description=p@chr15:65823105..65823143,+
|description=CAGE_peak_at_chr15:65823105..65823143,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:65823105..65823143,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr15:65823105..65823143,+ | |||
|id=chr15:65823105..65823143,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000312;4.06e-27;5!CL:0000240;8.47e-23;6!CL:0000311;8.47e-23;6!CL:0000079;8.47e-23;6!CL:0000237;8.47e-23;6!CL:0000123;1.07e-17;2!CL:0000242;1.07e-17;2!CL:0000362;1.41e-15;9!CL:0002159;2.19e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,4.63e-27,5;CL:0000240,9.46e-23,6;CL:0000311,9.46e-23,6;CL:0000079,9.46e-23,6;CL:0000237,9.46e-23,6;CL:0000036,9.46e-23,6;CL:0000357,9.46e-23,6;CL:0000114,9.46e-23,6;CL:0000242,1.07e-17,2;CL:0000362,1.52e-15,9;CL:0002159,2.29e-10,14 | |||
|ontology_enrichment_development_v019=CL:0000357;8.47e-23;6!CL:0000114;8.47e-23;6!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0006215;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:162!1.84e-10!235;DOID:14566!3.32e-10!239;DOID:0050687!2.86e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0001003;9.24e-10;15!UBERON:0007376;9.24e-10;15!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22!UBERON:0002037;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0001003,9.66e-10,15;UBERON:0007376,9.66e-10,15;UBERON:0007383,9.66e-10,15;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0002037,8.48e-07,6;UBERON:0006215,8.48e-07,6 | |||
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| ||
|short_description=p@chr15:65823105..65823143,+ | |||
}} | }} |
Latest revision as of 03:28, 25 July 2015
Short description: | p@chr15:65823105..65823143, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:65823105..65823143, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 4.63e-27 | 5 |
stratified squamous epithelial cell | 9.46e-23 | 6 |
keratin accumulating cell | 9.46e-23 | 6 |
stratified epithelial cell | 9.46e-23 | 6 |
keratinizing barrier epithelial cell | 9.46e-23 | 6 |
epithelial fate stem cell | 9.46e-23 | 6 |
stratified epithelial stem cell | 9.46e-23 | 6 |
surface ectodermal cell | 9.46e-23 | 6 |
Merkel cell | 1.07e-17 | 2 |
epidermal cell | 1.52e-15 | 9 |
general ecto-epithelial cell | 2.29e-10 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
skin epidermis | 9.66e-10 | 15 |
outer epithelium | 9.66e-10 | 15 |
enveloping layer of ectoderm | 9.66e-10 | 15 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
cerebellum | 8.48e-07 | 6 |
rhombic lip | 8.48e-07 | 6 |