FFCP PHASE1:Hg19::chr15:56209278..56209284,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=4734 | |EntrezGene=entrezgene:4734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7727 | |HGNC=HGNC:7727 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000506154_5end | |association_with_transcript=21bp_to_ENST00000506154_5end | ||
|cluster_id=chr15:56209278..56209284,- | |||
|description=CAGE_peak_6_at_NEDD4_5end | |description=CAGE_peak_6_at_NEDD4_5end | ||
|id=chr15:56209278..56209284,- | |id=chr15:56209278..56209284,- |
Revision as of 02:42, 25 July 2015
Short description: | p6@NEDD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NEDD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000506154_5end |
EntrezGene: | 4734 |
HGNC: | 7727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@NEDD4 |
---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 1.59e-14 | 6 |
bladder cell | 3.61e-10 | 1 |
lower urinary tract cell | 3.61e-10 | 1 |
skin fibroblast | 9.86e-10 | 23 |
fibroblast | 1.75e-08 | 76 |
fibroblast of dermis | 6.48e-07 | 6 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
periodontium | 1.59e-14 | 6 |
dentition | 1.59e-14 | 6 |
surface structure | 2.43e-13 | 99 |
skull | 1.57e-12 | 7 |
mouth | 6.03e-11 | 29 |
stomodeum | 6.03e-11 | 29 |
urinary bladder urothelium | 3.61e-10 | 1 |
wall of urinary bladder | 3.61e-10 | 1 |
mucosa of urinary bladder | 3.61e-10 | 1 |
cranial skeletal system | 3.71e-08 | 11 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.95e-11 | 1 |
musculoskeletal system disease | 3.78e-08 | 5 |
myotonic disease | 3.78e-08 | 5 |
muscle tissue disease | 3.78e-08 | 5 |
myopathy | 3.78e-08 | 5 |
muscular disease | 3.78e-08 | 5 |
myotonic dystrophy | 3.78e-08 | 5 |
Showing 1 to 7 of 7 entries