FFCP PHASE1:Hg19::chr15:52335974..52335976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:52335974..52335976,+ | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_at_chr15:52335974..52335976,+ | |description=CAGE_peak_at_chr15:52335974..52335976,+ | ||
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|ontology_enrichment_celltype=CL:0000860!8.36e-14!45;CL:0000839!2.75e-13!70;CL:0002057!4.27e-13!42;CL:0000557!5.60e-13!71;CL:0000766!2.24e-12!76;CL:0000738!2.57e-12!140;CL:0002009!3.92e-12!65;CL:0002194!3.63e-11!63;CL:0000576!3.63e-11!63;CL:0000040!3.63e-11!63;CL:0000559!3.63e-11!63;CL:0002031!5.68e-11!124;CL:0000037!1.42e-10!172;CL:0000566!1.42e-10!172;CL:0002087!8.56e-10!119;CL:0000763!1.11e-09!112;CL:0000049!1.11e-09!112;CL:0002032!9.47e-09!165;CL:0000837!9.47e-09!165;CL:0000988!2.24e-08!182 | |ontology_enrichment_celltype=CL:0000860!8.36e-14!45;CL:0000839!2.75e-13!70;CL:0002057!4.27e-13!42;CL:0000557!5.60e-13!71;CL:0000766!2.24e-12!76;CL:0000738!2.57e-12!140;CL:0002009!3.92e-12!65;CL:0002194!3.63e-11!63;CL:0000576!3.63e-11!63;CL:0000040!3.63e-11!63;CL:0000559!3.63e-11!63;CL:0002031!5.68e-11!124;CL:0000037!1.42e-10!172;CL:0000566!1.42e-10!172;CL:0002087!8.56e-10!119;CL:0000763!1.11e-09!112;CL:0000049!1.11e-09!112;CL:0002032!9.47e-09!165;CL:0000837!9.47e-09!165;CL:0000988!2.24e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.48e-16;33!CL:0002057;2.48e-16;33!CL:0000473;6.59e-14;39!CL:0000234;6.59e-14;39!CL:0000576;4.98e-13;48!CL:0000766;4.51e-12;69!CL:0002393;2.18e-09;6!CL:0002397;2.18e-09;6!CL:0000226;4.07e-08;3!CL:0000623;4.07e-08;3!CL:0000842;4.07e-08;3 | |ontology_enrichment_celltype_v019=CL:0000860;2.48e-16;33!CL:0002057;2.48e-16;33!CL:0000473;6.59e-14;39!CL:0000234;6.59e-14;39!CL:0000576;4.98e-13;48!CL:0000766;4.51e-12;69!CL:0002393;2.18e-09;6!CL:0002397;2.18e-09;6!CL:0000226;4.07e-08;3!CL:0000623;4.07e-08;3!CL:0000842;4.07e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.86e-23,42;CL:0002057,4.86e-23,42;CL:0000557,5.74e-20,67;CL:0000473,8.72e-20,48;CL:0000234,8.72e-20,48;CL:0000766,2.83e-18,72;CL:0000839,9.07e-18,66;CL:0002009,4.87e-17,61;CL:0000738,2.42e-16,136;CL:0002194,3.11e-15,59;CL:0000576,3.11e-15,59;CL:0000040,3.11e-15,59;CL:0000559,3.11e-15,59;CL:0002031,6.18e-14,120;CL:0002087,5.51e-13,115;CL:0000763,1.34e-12,108;CL:0000049,1.34e-12,108;CL:0000037,2.64e-12,168;CL:0000988,1.96e-11,177;CL:0002032,1.70e-10,161;CL:0000837,1.70e-10,161;CL:0000623,2.20e-08,3;CL:0000825,2.20e-08,3;CL:0000226,4.39e-08,3;CL:0000842,4.39e-08,3;CL:0000511,6.24e-07,1;CL:0002625,6.24e-07,1;CL:0000216,6.24e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-20;42 | |ontology_enrichment_development_v019=CL:0002057;1.55e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.38e-11!86;UBERON:0002371!6.39e-11!80;UBERON:0004765!7.50e-10!101;UBERON:0001434!7.50e-10!101;UBERON:0002405!1.92e-09!115;UBERON:0002390!2.14e-08!102;UBERON:0003061!2.14e-08!102;UBERON:0002193!5.13e-08!112 | |ontology_enrichment_uberon=UBERON:0001474!2.38e-11!86;UBERON:0002371!6.39e-11!80;UBERON:0004765!7.50e-10!101;UBERON:0001434!7.50e-10!101;UBERON:0002405!1.92e-09!115;UBERON:0002390!2.14e-08!102;UBERON:0003061!2.14e-08!102;UBERON:0002193!5.13e-08!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.39e-17,76;UBERON:0002390,4.81e-16,98;UBERON:0003061,4.81e-16,98;UBERON:0001474,1.10e-15,82;UBERON:0002193,3.43e-14,108;UBERON:0004765,5.59e-14,90;UBERON:0002405,2.05e-13,93;UBERON:0001434,3.13e-12,100;UBERON:0001136,6.24e-07,1;UBERON:0001343,6.24e-07,1;UBERON:0004910,6.24e-07,1;UBERON:0005154,6.24e-07,1;UBERON:0005295,6.24e-07,1;UBERON:0004813,6.24e-07,1;UBERON:0005297,6.24e-07,1;UBERON:0005294,6.24e-07,1;UBERON:0010141,6.24e-07,1;UBERON:0005891,6.24e-07,1;UBERON:0002426,6.60e-07,1;UBERON:0003831,6.60e-07,1;UBERON:0003898,6.60e-07,1;UBERON:0004830,6.60e-07,1;UBERON:0003830,6.60e-07,1;UBERON:0005175,6.60e-07,1;UBERON:0001774,6.60e-07,1;UBERON:0001103,6.60e-07,1;UBERON:0010084,6.60e-07,1;UBERON:0002204,7.59e-07,167 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.687720651731561,0.246301768349837,0.629686250509434,0.393364276848904,0.383829398097213,1.54816123316076,0,0.30120591877825,0,0.0774672005803016,0.284338464974843,0.587200878669695,9.97191735357379,4.01088894940283,7.37836960433896,0,0.32389366601898,0,0.145398238779565,1.13362783106643,0.485168122375632,1.16214518452842,2.87817521615278,1.54853185447552,2.58923153089935,0.768482119587302,0.945928919554341,2.41321976515633,1.29096936716765,0,1.12945403725563,0.545812300115692,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0.598390972864896,0,1.7412554317715,0.56738522469114,0.622822248995575,2.26123798731069,2.60741459210101,0.65156653411535,0,0.368277635987565,0,0,0.425208599930087,0.419317291016752,0.336985893439485,0.450530678524519,0.32145117339416,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0.590129310341499,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.384273959177026,0.260118695119756,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0.318565414324097,0,0.950452044448374,0,0,0,0,0.821127996921047,0,1.06976078313403,0.579297615531196,0,0,0,0,0,0.434539556882471,0,0,0.283604451492204,0,0.175669571386252,0.327447688744282,0.364295288292542,0,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0.675105328965065,0,0,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0.245976877086227,0,0.109750285408626,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0.743155811443641,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0.264145302039678,1.4512968087854,0.576479813667846,1.64115163454294,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.394061520403854,1.50939302401662,1.79680250791648,0,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0,0.271265023699736,0.415941723061614,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,1.44737618286021,1.2942852049117,0.74709290462411,0,0,0,0,0.460385919864187,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0.460404944679482,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0.438519753291869,0.522870902049801,0,0,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0,0,0.275673144969061,0.429680979473094,0.290033387828457,0.170453254832202,0.0890320356467374,0.165284915360978,0.192190067365106,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,0.423347165447766,0,0,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0,0,0,0.921722292925374,0.447352215784832,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0.568272293612826,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0.422250816255987,0.398495976502139,0.276283915531148,0.251932747854276,0.409074730008619,0.123084805461069,0,0,1.43216939740487,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0.7812832832557,0.174919999992391,1.44999915086959,0.227586896570999,0,0,1.03423011972439,0.583209226766509,0,0,0.241192877250816,1.52581736317083,0.331737779793674,0,0,0.32681539055697,0,0.307801034015188,0.227884111694002,0.922255617552241,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.627921025580099,0,0,0.19606253431774,0.167821586975843,0,0,0,0.163232808159148,0,0.432777279484182,1.99052386215701,0.442287822516696,0.611030144933625,0,0,0,0.808813595768125,1.60515529459758,0.468528891450678,0.182454789215666,0,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0,0,0.0967563312890851,0.584714536689484,0.328461828212837,0.0969890164884194,0.176512253383001,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0.160317640503067,0,0,0,0.229073192331831,0.514784993585894,0.288109595976299,0.124252535565433,0.2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| ||
|short_description=p@chr15:52335974..52335976,+ | |short_description=p@chr15:52335974..52335976,+ | ||
}} | }} |
Latest revision as of 02:31, 25 July 2015
Short description: | p@chr15:52335974..52335976, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:52335974..52335976, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.86e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.86e-23 | 42 |
granulocyte monocyte progenitor cell | 5.74e-20 | 67 |
defensive cell | 8.72e-20 | 48 |
phagocyte | 8.72e-20 | 48 |
myeloid leukocyte | 2.83e-18 | 72 |
myeloid lineage restricted progenitor cell | 9.07e-18 | 66 |
macrophage dendritic cell progenitor | 4.87e-17 | 61 |
leukocyte | 2.42e-16 | 136 |
monopoietic cell | 3.11e-15 | 59 |
monocyte | 3.11e-15 | 59 |
monoblast | 3.11e-15 | 59 |
promonocyte | 3.11e-15 | 59 |
hematopoietic lineage restricted progenitor cell | 6.18e-14 | 120 |
nongranular leukocyte | 5.51e-13 | 115 |
myeloid cell | 1.34e-12 | 108 |
common myeloid progenitor | 1.34e-12 | 108 |
hematopoietic stem cell | 2.64e-12 | 168 |
hematopoietic cell | 1.96e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.70e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-10 | 161 |
natural killer cell | 2.20e-08 | 3 |
pro-NK cell | 2.20e-08 | 3 |
single nucleate cell | 4.39e-08 | 3 |
mononuclear cell | 4.39e-08 | 3 |
androgen binding protein secreting cell | 6.24e-07 | 1 |
seminiferous tubule epithelial cell | 6.24e-07 | 1 |
Sertoli cell | 6.24e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.39e-17 | 76 |
hematopoietic system | 4.81e-16 | 98 |
blood island | 4.81e-16 | 98 |
bone element | 1.10e-15 | 82 |
hemolymphoid system | 3.43e-14 | 108 |
skeletal element | 5.59e-14 | 90 |
immune system | 2.05e-13 | 93 |
skeletal system | 3.13e-12 | 100 |
mesothelium | 6.24e-07 | 1 |
seminiferous tubule of testis | 6.24e-07 | 1 |
epithelium of male gonad | 6.24e-07 | 1 |
epithelial cord | 6.24e-07 | 1 |
sex cord | 6.24e-07 | 1 |
seminiferous tubule epithelium | 6.24e-07 | 1 |
testis sex cord | 6.24e-07 | 1 |
genital ridge | 6.24e-07 | 1 |
primitive sex cord of indifferent gonad | 6.24e-07 | 1 |
coelomic epithelium | 6.24e-07 | 1 |
chest muscle | 6.60e-07 | 1 |
respiratory system muscle | 6.60e-07 | 1 |
skeletal muscle of trunk | 6.60e-07 | 1 |
respiratory system skeletal muscle | 6.60e-07 | 1 |
thoracic segment muscle | 6.60e-07 | 1 |
chest organ | 6.60e-07 | 1 |
muscle of trunk | 6.60e-07 | 1 |
diaphragm | 6.60e-07 | 1 |
future diaphragm | 6.60e-07 | 1 |
musculoskeletal system | 7.59e-07 | 167 |