FFCP PHASE1:Hg19::chr15:48312676..48312679,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:48312676..48312679,+ | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_at_chr15:48312676..48312679,+ | |||
|id=chr15:48312676..48312679,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.12e-13!52;CL:0000542!2.17e-13!53;CL:0000051!2.17e-13!53;CL:0000080!5.89e-13!6;CL:0000946!1.32e-09!1;CL:0000786!1.32e-09!1;CL:0000980!1.32e-09!1;CL:0000945!3.33e-08!24;CL:0000826!3.33e-08!24;CL:0000084!9.03e-08!25;CL:0000827!9.03e-08!25;CL:0000988!4.23e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000946;4.59e-23;1!CL:0000786;4.59e-23;1!CL:0000333;1.29e-18;5!CL:0002321;7.75e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.10e-23,1;CL:0000786,4.10e-23,1;CL:0000980,4.10e-23,1;CL:0000785,2.90e-12,2;CL:0000955,2.90e-12,2;CL:0000818,2.90e-12,2;CL:0000954,2.90e-12,2;CL:0000816,2.90e-12,2;CL:0000817,1.30e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000954;3.06e-12;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.69e-13!10;DOID:2531!3.16e-11!51;DOID:0060083!3.16e-11!51;DOID:2355!1.12e-09!1;DOID:0060060!3.00e-09!1;DOID:0060061!3.00e-09!1;DOID:8691!3.00e-09!1;DOID:1240!8.06e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2355;2.34e-23;1!DOID:169;1.09e-15;6!DOID:74;2.19e-12;2!DOID:171;8.27e-10;10!DOID:5409;6.50e-07;4!DOID:1287;7.91e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.62e-23,1;DOID:169,9.74e-16,6;DOID:74,2.32e-12,2;DOID:171,7.74e-10,10;DOID:5409,6.50e-07,4;DOID:1287,8.14e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.01e-11!3;UBERON:0004854!3.01e-11!3;UBERON:0009034!3.01e-11!3;UBERON:0002095!3.01e-11!3;UBERON:0004782!3.01e-11!3;UBERON:0003281!3.01e-11!3;UBERON:0009664!3.01e-11!3;UBERON:0002296!3.01e-11!3;UBERON:0005602!3.01e-11!3;UBERON:0001179!3.01e-11!3;UBERON:0006293!3.01e-11!3;UBERON:0002331!5.72e-08!10;UBERON:0000358!5.72e-08!10;UBERON:0000307!5.72e-08!10;UBERON:0000091!5.72e-08!10;UBERON:0000087!5.72e-08!10;UBERON:0007806!5.72e-08!10;UBERON:0008780!5.72e-08!10;UBERON:0005728!5.72e-08!10;UBERON:0000013!1.32e-07!5;UBERON:0002410!1.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.41e-20;10!UBERON:0000013;1.29e-18;5!UBERON:0002410;1.29e-18;5!UBERON:0000178;8.20e-14;15!UBERON:0000179;8.20e-14;15!UBERON:0000463;8.20e-14;15!UBERON:0000010;8.57e-11;8!UBERON:0000478;7.03e-09;24!UBERON:0002390;7.04e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.66e-20,10;UBERON:0000358,2.66e-20,10;UBERON:0000307,2.66e-20,10;UBERON:0000091,2.66e-20,10;UBERON:0000087,2.66e-20,10;UBERON:0007010,2.66e-20,10;UBERON:0007806,2.66e-20,10;UBERON:0008780,2.66e-20,10;UBERON:0005728,2.66e-20,10;UBERON:0000013,1.13e-18,5;UBERON:0002410,1.13e-18,5;UBERON:0000178,8.76e-14,15;UBERON:0000179,8.76e-14,15;UBERON:0000463,8.76e-14,15;UBERON:0000010,7.96e-11,8;UBERON:0000478,7.32e-09,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6686901581256,1.48276726735803,1.14864144456001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2015066337104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,3.18201860353331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,14.0683808434017,0,0,1.63814457288021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49804183822513,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.4508005352378,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:48312676..48312679,+ | |||
}} |
Latest revision as of 02:07, 25 July 2015
Short description: | p@chr15:48312676..48312679, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:48312676..48312679, + |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.10e-23 | 1 |
plasma cell | 4.10e-23 | 1 |
plasmablast | 4.10e-23 | 1 |
mature B cell | 2.90e-12 | 2 |
pre-B-II cell | 2.90e-12 | 2 |
transitional stage B cell | 2.90e-12 | 2 |
small pre-B-II cell | 2.90e-12 | 2 |
immature B cell | 2.90e-12 | 2 |
precursor B cell | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.66e-20 | 10 |
blastocyst | 2.66e-20 | 10 |
blastula | 2.66e-20 | 10 |
bilaminar disc | 2.66e-20 | 10 |
inner cell mass | 2.66e-20 | 10 |
cleaving embryo | 2.66e-20 | 10 |
connecting stalk | 2.66e-20 | 10 |
inner cell mass derived epiblast | 2.66e-20 | 10 |
extraembryonic mesoderm | 2.66e-20 | 10 |
sympathetic nervous system | 1.13e-18 | 5 |
autonomic nervous system | 1.13e-18 | 5 |
blood | 8.76e-14 | 15 |
haemolymphatic fluid | 8.76e-14 | 15 |
organism substance | 8.76e-14 | 15 |
peripheral nervous system | 7.96e-11 | 8 |
extraembryonic structure | 7.32e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.62e-23 | 1 |
neuroendocrine tumor | 9.74e-16 | 6 |
hematopoietic system disease | 2.32e-12 | 2 |
neuroectodermal tumor | 7.74e-10 | 10 |
lung small cell carcinoma | 6.50e-07 | 4 |
cardiovascular system disease | 8.14e-07 | 4 |