FFCP PHASE1:Hg19::chr15:43478059..43478094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:43478059..43478094,- | |||
|coexpression_cluster_id=C3488 | |||
|description=CAGE_peak_at_chr15:43478059..43478094,- | |description=CAGE_peak_at_chr15:43478059..43478094,- | ||
|id=chr15:43478059..43478094,- | |id=chr15:43478059..43478094,- | ||
|ontology_enrichment_celltype=CL:0000838!2.18e-14!52;CL:0000542!4.78e-14!53;CL:0000051!4.78e-14!53;CL:0000791!1.38e-11!18;CL:0000789!1.38e-11!18;CL:0002420!1.38e-11!18;CL:0002419!1.38e-11!18;CL:0000790!1.38e-11!18;CL:0000084!4.76e-11!25;CL:0000827!4.76e-11!25;CL:0000037!1.17e-10!172;CL:0000566!1.17e-10!172;CL:0000738!2.63e-10!140;CL:0000988!1.35e-09!182;CL:0002032!1.84e-08!165;CL:0000837!1.84e-08!165;CL:0000625!6.45e-08!11;CL:0002087!9.63e-08!119;CL:0002031!3.23e-07!124;CL:0000236!4.61e-07!14 | |ontology_enrichment_celltype=CL:0000838!2.18e-14!52;CL:0000542!4.78e-14!53;CL:0000051!4.78e-14!53;CL:0000791!1.38e-11!18;CL:0000789!1.38e-11!18;CL:0002420!1.38e-11!18;CL:0002419!1.38e-11!18;CL:0000790!1.38e-11!18;CL:0000084!4.76e-11!25;CL:0000827!4.76e-11!25;CL:0000037!1.17e-10!172;CL:0000566!1.17e-10!172;CL:0000738!2.63e-10!140;CL:0000988!1.35e-09!182;CL:0002032!1.84e-08!165;CL:0000837!1.84e-08!165;CL:0000625!6.45e-08!11;CL:0002087!9.63e-08!119;CL:0002031!3.23e-07!124;CL:0000236!4.61e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.06e-19;18!CL:0000789;4.06e-19;18!CL:0002419;4.06e-19;18!CL:0000084;1.64e-16;25!CL:0000625;9.85e-13;11!CL:0000542;4.51e-11;53!CL:0000624;1.55e-07;6!CL:0000236;7.76e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.08e-19,18;CL:0000789,3.08e-19,18;CL:0002420,3.08e-19,18;CL:0002419,3.08e-19,18;CL:0000790,3.08e-19,18;CL:0000838,6.40e-18,52;CL:0000542,2.35e-17,53;CL:0000051,2.35e-17,53;CL:0000084,1.74e-16,25;CL:0000827,1.74e-16,25;CL:0000625,9.01e-13,11;CL:0000738,3.79e-09,136;CL:0000624,1.15e-07,6;CL:0000037,1.19e-07,168;CL:0000988,6.91e-07,177;CL:0002087,8.02e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;4.06e-19;18!CL:0000051;4.51e-11;53!UBERON:0006601;2.13e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.83e-23!115;UBERON:0001049!8.21e-18!57;UBERON:0005068!8.21e-18!57;UBERON:0006241!8.21e-18!57;UBERON:0007135!8.21e-18!57;UBERON:0000073!8.66e-18!94;UBERON:0001016!8.66e-18!94;UBERON:0001017!1.75e-16!82;UBERON:0000955!3.18e-16!69;UBERON:0006238!3.18e-16!69;UBERON:0005743!1.61e-15!86;UBERON:0002616!2.16e-15!59;UBERON:0002780!5.46e-15!41;UBERON:0001890!5.46e-15!41;UBERON:0006240!5.46e-15!41;UBERON:0003080!4.15e-14!42;UBERON:0001893!2.19e-12!34;UBERON:0002020!2.31e-12!34;UBERON:0003528!2.31e-12!34;UBERON:0002791!5.75e-12!33;UBERON:0001869!1.93e-11!32;UBERON:0002346!1.49e-10!90;UBERON:0003075!9.96e-10!86;UBERON:0007284!9.96e-10!86;UBERON:0001950!1.15e-09!20;UBERON:0002619!2.90e-09!22;UBERON:0000956!3.85e-08!25;UBERON:0000203!3.85e-08!25;UBERON:0003056!1.91e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!3.83e-23!115;UBERON:0001049!8.21e-18!57;UBERON:0005068!8.21e-18!57;UBERON:0006241!8.21e-18!57;UBERON:0007135!8.21e-18!57;UBERON:0000073!8.66e-18!94;UBERON:0001016!8.66e-18!94;UBERON:0001017!1.75e-16!82;UBERON:0000955!3.18e-16!69;UBERON:0006238!3.18e-16!69;UBERON:0005743!1.61e-15!86;UBERON:0002616!2.16e-15!59;UBERON:0002780!5.46e-15!41;UBERON:0001890!5.46e-15!41;UBERON:0006240!5.46e-15!41;UBERON:0003080!4.15e-14!42;UBERON:0001893!2.19e-12!34;UBERON:0002020!2.31e-12!34;UBERON:0003528!2.31e-12!34;UBERON:0002791!5.75e-12!33;UBERON:0001869!1.93e-11!32;UBERON:0002346!1.49e-10!90;UBERON:0003075!9.96e-10!86;UBERON:0007284!9.96e-10!86;UBERON:0001950!1.15e-09!20;UBERON:0002619!2.90e-09!22;UBERON:0000956!3.85e-08!25;UBERON:0000203!3.85e-08!25;UBERON:0003056!1.91e-07!61 | ||
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| ||
|short_description=p@chr15:43478059..43478094,- | |short_description=p@chr15:43478059..43478094,- | ||
}} | }} |
Latest revision as of 01:45, 25 July 2015
Short description: | p@chr15:43478059..43478094, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:43478059..43478094, - |
Coexpression cluster: | C3488_thymus_CD4_giant_Peripheral_CD8_CD19_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.08e-19 | 18 |
alpha-beta T cell | 3.08e-19 | 18 |
immature T cell | 3.08e-19 | 18 |
mature T cell | 3.08e-19 | 18 |
immature alpha-beta T cell | 3.08e-19 | 18 |
lymphoid lineage restricted progenitor cell | 6.40e-18 | 52 |
lymphocyte | 2.35e-17 | 53 |
common lymphoid progenitor | 2.35e-17 | 53 |
T cell | 1.74e-16 | 25 |
pro-T cell | 1.74e-16 | 25 |
CD8-positive, alpha-beta T cell | 9.01e-13 | 11 |
leukocyte | 3.79e-09 | 136 |
CD4-positive, alpha-beta T cell | 1.15e-07 | 6 |
hematopoietic stem cell | 1.19e-07 | 168 |
hematopoietic cell | 6.91e-07 | 177 |
nongranular leukocyte | 8.02e-07 | 115 |