FFCP PHASE1:Hg19::chr15:39410943..39410954,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:39410943..39410954,-
|short_description=p2@ENST00000560197
|description=CAGE_peak_2_at_ENST00000560197_5end
|association_with_transcript=-29bp_to_ENST0000...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000560197_5end | |||
|cluster_id=chr15:39410943..39410954,- | |||
|coexpression_cluster_id=C3481 | |||
|description=CAGE_peak_2_at_ENST00000560197_5end | |||
|id=chr15:39410943..39410954,- | |||
|ontology_enrichment_celltype=CL:0002620!1.88e-18!23;CL:0000057!1.08e-17!75;CL:0000055!1.54e-12!180;CL:0002580!2.84e-11!3;CL:0000197!2.10e-09!6;CL:0000098!2.10e-09!6;CL:0002167!2.10e-09!6;CL:0002617!1.19e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.04e-10;3!CL:1000306;2.35e-08;4!CL:0002547;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.20e-10,3;CL:1000306,2.26e-08,4;CL:0002547,2.26e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.69e-11!5;DOID:450!2.69e-11!5;DOID:66!2.69e-11!5;DOID:423!2.69e-11!5;DOID:0080000!2.69e-11!5;DOID:11722!2.69e-11!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.82e-09!40;UBERON:0000310!2.00e-08!10;UBERON:0002199!3.94e-08!45;UBERON:0002416!3.94e-08!45;UBERON:0001443!1.27e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.35e-08;4!UBERON:0000415;2.35e-08;4!UBERON:0007240;2.35e-08;4!UBERON:0005742;2.35e-08;4!UBERON:0005734;2.35e-08;4!UBERON:0004664;2.35e-08;4!UBERON:0004663;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.26e-08,4;UBERON:0007240,2.26e-08,4;UBERON:0005742,2.26e-08,4;UBERON:0005734,2.26e-08,4;UBERON:0004664,2.26e-08,4;UBERON:0004663,2.26e-08,4 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0.496971951695318,0.12663051166458,1.45650098894541,0,0,0,0,0.98667019366864,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.919463387397059,0,0.113432183160021,0.538168907066586,0.85422955527427,0.423863802319124,0,0.309157587715317,0.257640540045629,0.558350568994769,0.168776332241266,0,0.504867548488229,0.920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0.356857977594324,0.315404830067869,1.40569697991256,0,2.27407504055985,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.992431231275107,1.07423381301644,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94125263177723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.770479321629213,0,0,0,2.54674721756217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0.496971951695318,0.12663051166458,1.45650098894541,0,0,0,0,0.98667019366864,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.919463387397059,0,0.113432183160021,0.538168907066586,0.85422955527427,0.423863802319124,0,0.309157587715317,0.257640540045629,0.558350568994769,0.168776332241266,0,0.504867548488229,0.920498986422993,0.161646056818812,0.710019185033229,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0.356857977594324,0.315404830067869,1.40569697991256,0,2.27407504055985,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.992431231275107,1.07423381301644,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94125263177723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0.770479321629213,0,0,0,2.54674721756217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000560197 | |||
}} | }} |
Latest revision as of 01:09, 25 July 2015
Short description: | p2@ENST00000560197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000560197_5end |
Coexpression cluster: | C3481_liposarcoma_mesothelioma_Fibroblast_Ewing_Preadipocyte_Olfactory_Adipocyte |
Association with transcript: | -29bp_to_ENST00000560197_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.20e-10 | 3 |
fibroblast of tunica adventitia of artery | 2.26e-08 | 4 |
fibroblast of the aortic adventitia | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.26e-08 | 4 |
tunica adventitia of artery | 2.26e-08 | 4 |
adventitia | 2.26e-08 | 4 |
tunica adventitia of blood vessel | 2.26e-08 | 4 |
aorta tunica adventitia | 2.26e-08 | 4 |
aorta wall | 2.26e-08 | 4 |