FFCP PHASE1:Hg19::chr15:33384583..33384602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:33384583..33384602,- | |||
|description=CAGE_peak_at_chr15:33384583..33384602,- | |description=CAGE_peak_at_chr15:33384583..33384602,- | ||
|id=chr15:33384583..33384602,- | |id=chr15:33384583..33384602,- | ||
|ontology_enrichment_celltype=CL:0002556!1.17e-16!6;CL:0000791!5.51e-14!18;CL:0000789!5.51e-14!18;CL:0002420!5.51e-14!18;CL:0002419!5.51e-14!18;CL:0000790!5.51e-14!18;CL:0000084!1.91e-09!25;CL:0000827!1.91e-09!25;CL:0002552!2.62e-09!5;CL:0000625!3.40e-09!11 | |ontology_enrichment_celltype=CL:0002556!1.17e-16!6;CL:0000791!5.51e-14!18;CL:0000789!5.51e-14!18;CL:0002420!5.51e-14!18;CL:0002419!5.51e-14!18;CL:0000790!5.51e-14!18;CL:0000084!1.91e-09!25;CL:0000827!1.91e-09!25;CL:0002552!2.62e-09!5;CL:0000625!3.40e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.92e-22;18!CL:0000789;8.92e-22;18!CL:0002419;8.92e-22;18!CL:0000625;1.03e-18;11!CL:0002598;1.45e-17;2!CL:0000084;1.75e-15;25!CL:0002556;4.96e-13;6!CL:0000895;1.20e-09;1!CL:0002552;9.91e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.07e-22,18;CL:0000789,7.07e-22,18;CL:0002420,7.07e-22,18;CL:0002419,7.07e-22,18;CL:0000790,7.07e-22,18;CL:0000625,5.78e-19,11;CL:0002598,3.10e-17,2;CL:0000084,1.48e-15,25;CL:0000827,1.48e-15,25;CL:0002556,7.36e-13,6;CL:0000810,1.76e-09,1;CL:0000895,1.76e-09,1;CL:0002436,1.76e-09,1;CL:0002427,1.76e-09,1;CL:0002428,1.76e-09,1;CL:0002429,1.76e-09,1;CL:0002433,1.76e-09,1;CL:0002431,1.76e-09,1;CL:0002432,1.76e-09,1;CL:0000838,3.74e-09,52;CL:0000542,5.82e-09,53;CL:0000051,5.82e-09,53;CL:0002552,1.08e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;8.92e-22;18!CL:0002427;1.20e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!1.17e-16!6;UBERON:0003672!1.17e-16!6;UBERON:0003129!1.11e-11!11;UBERON:0000178!1.10e-10!15;UBERON:0000179!1.10e-10!15;UBERON:0000463!1.10e-10!15;UBERON:0000075!1.05e-09!13;UBERON:0005944!1.05e-09!13;UBERON:0004288!1.05e-09!13;UBERON:0003089!1.05e-09!13;UBERON:0000165!4.57e-08!28;UBERON:0000930!4.57e-08!28 | |ontology_enrichment_uberon=UBERON:0001758!1.17e-16!6;UBERON:0003672!1.17e-16!6;UBERON:0003129!1.11e-11!11;UBERON:0000178!1.10e-10!15;UBERON:0000179!1.10e-10!15;UBERON:0000463!1.10e-10!15;UBERON:0000075!1.05e-09!13;UBERON:0005944!1.05e-09!13;UBERON:0004288!1.05e-09!13;UBERON:0003089!1.05e-09!13;UBERON:0000165!4.57e-08!28;UBERON:0000930!4.57e-08!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0001758;4.96e-13;6!UBERON:0003672;4.96e-13;6!UBERON:0003129;3.01e-11;7!UBERON:0002185;1.45e-07;5!UBERON:0011137;2.46e-07;11!UBERON:0010323;2.46e-07;11!UBERON:0000165;2.48e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,7.36e-13,6;UBERON:0003672,7.36e-13,6;UBERON:0003129,4.22e-11,7;UBERON:0002185,1.96e-07,5;UBERON:0010323,3.03e-07,11;UBERON:0000165,5.30e-07,29;UBERON:0000930,5.30e-07,29 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17903228824749,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0.296573126324121,0,0,0.113309342697566,1.14966148080576,0,0,1.27426165729639,1.30216690771284,0,1.20460095262218,0.895906278080929,0,1.89421801635213,0,0,1.60464117470104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,3.0708579327942,0,1.18800285728205,0.494533858557114,0,0,0.505008341862199,1.12606667884768,1.10825646193673,0.438977620880838,0.30648779579902,1.35214253015937,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0,0.207328115540772,0,0,0.253991577168676,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0,1.07813787429759,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,1.02359116524534,1.28381696410176,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,0,0.238231775457789,0,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0,0,0,0,0,0,15.1588093389828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982631505060581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,1.81155412280008,0,0,10.817297816315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:33384583..33384602,- | |short_description=p@chr15:33384583..33384602,- | ||
}} | }} |
Latest revision as of 00:51, 25 July 2015
Short description: | p@chr15:33384583..33384602, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:33384583..33384602, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.07e-22 | 18 |
alpha-beta T cell | 7.07e-22 | 18 |
immature T cell | 7.07e-22 | 18 |
mature T cell | 7.07e-22 | 18 |
immature alpha-beta T cell | 7.07e-22 | 18 |
CD8-positive, alpha-beta T cell | 5.78e-19 | 11 |
bronchial smooth muscle cell | 3.10e-17 | 2 |
T cell | 1.48e-15 | 25 |
pro-T cell | 1.48e-15 | 25 |
fibroblast of periodontium | 7.36e-13 | 6 |
CD4-positive, alpha-beta thymocyte | 1.76e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.76e-09 | 1 |
mature CD4 single-positive thymocyte | 1.76e-09 | 1 |
resting double-positive thymocyte | 1.76e-09 | 1 |
double-positive blast | 1.76e-09 | 1 |
CD69-positive double-positive thymocyte | 1.76e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 1.76e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.76e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 1.76e-09 | 1 |
lymphoid lineage restricted progenitor cell | 3.74e-09 | 52 |
lymphocyte | 5.82e-09 | 53 |
common lymphoid progenitor | 5.82e-09 | 53 |
fibroblast of gingiva | 1.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
periodontium | 7.36e-13 | 6 |
dentition | 7.36e-13 | 6 |
skull | 4.22e-11 | 7 |
bronchus | 1.96e-07 | 5 |
cranial skeletal system | 3.03e-07 | 11 |
mouth | 5.30e-07 | 29 |
stomodeum | 5.30e-07 | 29 |