FFCP PHASE1:Hg19::chr15:22550782..22550787,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:22550782..22550787,+ | |||
|coexpression_cluster_id=C3474 | |||
|description=CAGE_peak_at_chr15:22550782..22550787,+ | |description=CAGE_peak_at_chr15:22550782..22550787,+ | ||
|id=chr15:22550782..22550787,+ | |id=chr15:22550782..22550787,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.70e-40!42;CL:0000860!2.46e-37!45;CL:0002393!1.14e-36!9;CL:0002397!1.14e-36!9;CL:0000875!6.74e-29!3;CL:0002396!6.74e-29!3;CL:0000766!1.04e-27!76;CL:0002194!1.36e-25!63;CL:0000576!1.36e-25!63;CL:0000040!1.36e-25!63;CL:0000559!1.36e-25!63;CL:0002009!9.52e-25!65;CL:0000839!7.60e-23!70;CL:0000557!1.70e-22!71;CL:0000763!4.67e-18!112;CL:0000049!4.67e-18!112;CL:0000738!4.98e-18!140;CL:0002087!9.88e-17!119;CL:0000037!3.70e-14!172;CL:0000566!3.70e-14!172;CL:0002031!6.98e-14!124;CL:0000767!2.79e-13!3;CL:0000988!3.18e-13!182;CL:0002032!4.30e-13!165;CL:0000837!4.30e-13!165;CL:0002127!4.33e-10!1;CL:0000914!4.33e-10!1;CL:0000911!4.33e-10!1;CL:0000814!4.33e-10!1;CL:0002042!4.33e-10!1;CL:0002039!4.33e-10!1;CL:0002040!4.33e-10!1;CL:0002041!4.33e-10!1 | |ontology_enrichment_celltype=CL:0002057!3.70e-40!42;CL:0000860!2.46e-37!45;CL:0002393!1.14e-36!9;CL:0002397!1.14e-36!9;CL:0000875!6.74e-29!3;CL:0002396!6.74e-29!3;CL:0000766!1.04e-27!76;CL:0002194!1.36e-25!63;CL:0000576!1.36e-25!63;CL:0000040!1.36e-25!63;CL:0000559!1.36e-25!63;CL:0002009!9.52e-25!65;CL:0000839!7.60e-23!70;CL:0000557!1.70e-22!71;CL:0000763!4.67e-18!112;CL:0000049!4.67e-18!112;CL:0000738!4.98e-18!140;CL:0002087!9.88e-17!119;CL:0000037!3.70e-14!172;CL:0000566!3.70e-14!172;CL:0002031!6.98e-14!124;CL:0000767!2.79e-13!3;CL:0000988!3.18e-13!182;CL:0002032!4.30e-13!165;CL:0000837!4.30e-13!165;CL:0002127!4.33e-10!1;CL:0000914!4.33e-10!1;CL:0000911!4.33e-10!1;CL:0000814!4.33e-10!1;CL:0002042!4.33e-10!1;CL:0002039!4.33e-10!1;CL:0002040!4.33e-10!1;CL:0002041!4.33e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000875;7.77e-118;3!CL:0002396;7.77e-118;3!CL:0002393;7.25e-08;6!CL:0002397;7.25e-08;6!CL:0000576;1.11e-07;48!CL:0000766;1.99e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,7.78e-118,3;CL:0002396,7.78e-118,3;CL:0002393,4.41e-70,9;CL:0002397,4.41e-70,9;CL:0000860,1.01e-15,42;CL:0002057,1.01e-15,42;CL:0000473,7.54e-14,48;CL:0000234,7.54e-14,48;CL:0002194,3.21e-11,59;CL:0000576,3.21e-11,59;CL:0000040,3.21e-11,59;CL:0000559,3.21e-11,59;CL:0002009,7.02e-11,61;CL:0000839,4.06e-10,66;CL:0000557,5.60e-10,67;CL:0000766,2.44e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;5.18e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;1.22e-14;3!DOID:3908;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.22e-14,3;DOID:3908,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.33e-20!102;UBERON:0003061!6.33e-20!102;UBERON:0002371!9.61e-20!80;UBERON:0001474!3.18e-18!86;UBERON:0002193!6.25e-18!112;UBERON:0004765!3.33e-15!101;UBERON:0001434!3.33e-15!101;UBERON:0002405!3.74e-15!115;UBERON:0002204!2.63e-08!167;UBERON:0003081!4.75e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.93e-09,76;UBERON:0001474,2.75e-08,82;UBERON:0004765,1.31e-07,90;UBERON:0002405,2.19e-07,93;UBERON:0002390,4.84e-07,98;UBERON:0003061,4.84e-07,98;UBERON:0001434,6.51e-07,100 | |||
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|short_description=p@chr15:22550782..22550787,+ | |short_description=p@chr15:22550782..22550787,+ | ||
}} | }} |
Latest revision as of 00:22, 25 July 2015
Short description: | p@chr15:22550782..22550787, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:22550782..22550787, + |
Coexpression cluster: | C3474_large_CD14CD16_CD14_Basophils_Peripheral_Whole_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 7.78e-118 | 3 |
CD14-low, CD16-positive monocyte | 7.78e-118 | 3 |
intermediate monocyte | 4.41e-70 | 9 |
CD14-positive, CD16-positive monocyte | 4.41e-70 | 9 |
classical monocyte | 1.01e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-15 | 42 |
defensive cell | 7.54e-14 | 48 |
phagocyte | 7.54e-14 | 48 |
monopoietic cell | 3.21e-11 | 59 |
monocyte | 3.21e-11 | 59 |
monoblast | 3.21e-11 | 59 |
promonocyte | 3.21e-11 | 59 |
macrophage dendritic cell progenitor | 7.02e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.06e-10 | 66 |
granulocyte monocyte progenitor cell | 5.60e-10 | 67 |
myeloid leukocyte | 2.44e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.93e-09 | 76 |
bone element | 2.75e-08 | 82 |
skeletal element | 1.31e-07 | 90 |
immune system | 2.19e-07 | 93 |
hematopoietic system | 4.84e-07 | 98 |
blood island | 4.84e-07 | 98 |
skeletal system | 6.51e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.22e-14 | 3 |
non-small cell lung carcinoma | 2.53e-09 | 5 |