FFCP PHASE1:Hg19::chr15:101455438..101455471,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:101455438..101455471,+ to FFCP PHASE1:Hg19::chr15:101455438..101455471,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:101455438..101455471,+ | |||
|coexpression_cluster_id=C908 | |||
|description=CAGE_peak_at_chr15:101455438..101455471,+ | |||
|id=chr15:101455438..101455471,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.87e-12!254;CL:0002321!1.89e-11!248;CL:0000220!2.11e-11!246;CL:0000077!1.10e-09!19;CL:0000076!1.33e-09!62;CL:0000222!6.78e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000077;8.78e-16;19!CL:0000359;6.59e-08;32!CL:0002539;8.68e-08;10!CL:0002593;1.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,7.79e-16,19;CL:0000076,1.60e-09,63;CL:0000222,2.93e-08,121;CL:0000359,5.18e-08,32;CL:0002539,7.74e-08,10;CL:0002593,2.69e-07,2;CL:0000066,8.50e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.31e-09!14;DOID:120!8.99e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.56e-13;14!DOID:120;7.43e-10;27!DOID:193;4.89e-09;29!DOID:1749;1.33e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.59e-13,14;DOID:120,6.03e-10,27;DOID:193,4.03e-09,29;DOID:1749,9.54e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004458!6.41e-10!49;UBERON:0002100!1.39e-09!216;UBERON:0003886!1.76e-09!63;UBERON:0003104!9.54e-09!238;UBERON:0009142!9.54e-09!238;UBERON:0002323!1.78e-08!46;UBERON:0005256!1.92e-08!143;UBERON:0005156!1.51e-07!59;UBERON:0000990!1.51e-07!59;UBERON:0002553!1.87e-07!70;UBERON:0004122!2.01e-07!15;UBERON:0000486!3.29e-07!82;UBERON:0000481!5.69e-07!347;UBERON:0000475!9.52e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.16e-10;13!UBERON:0003134;3.08e-08;33!UBERON:0000991;3.51e-08;21!UBERON:0004237;8.68e-08;10!UBERON:0004695;8.68e-08;10!UBERON:0002111;8.68e-08;10!UBERON:0004178;8.68e-08;10!UBERON:0002119;1.65e-07;4!UBERON:0002456;1.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,5.85e-11,13;UBERON:0004176,4.92e-10,22;UBERON:0005156,1.80e-08,59;UBERON:0000990,1.80e-08,59;UBERON:0000991,2.26e-08,21;UBERON:0009196,2.26e-08,21;UBERON:0009117,2.26e-08,21;UBERON:0005564,2.26e-08,21;UBERON:0004237,7.74e-08,10;UBERON:0004695,7.74e-08,10;UBERON:0002111,7.74e-08,10;UBERON:0004178,7.74e-08,10;UBERON:0003134,7.89e-08,37;UBERON:0000474,7.89e-08,37;UBERON:0004458,8.46e-08,49;UBERON:0002119,9.41e-08,4;UBERON:0002456,2.69e-07,2;UBERON:0002323,3.67e-07,46;UBERON:0003100,7.42e-07,41;UBERON:0003133,9.61e-07,48 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,1.0007329835313,2.23480547213644,0,0,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0,0,5.3786011716142,0.602694528023977,2.19093027116212,2.92759679274304,0.246242116153576,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0.633152558322899,0,0,0.709336764396714,0,0,0.74000264525148,0,0.67355336034844,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.794025282120147,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0.161646056818812,0,0,0,1.54608682530637,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0.354920400119532,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.539325232640658,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0.100528972411631,0.555530670951178,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,1.87467667973554,0.16798212819886,0.708875486211932,0.447792613514241,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,15.3734082300389,9.58686804460323,19.9945982364114,0,0,0,0,0,1.42636905040718,0.579125226670317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0,0.532685175939381,0.246381468041427,1.03850885836724,1.51073491997947,0,3.40860999515584,2.4861867012692,0.459257792658427,0.364182336013434,0.917870904715969,0.451199612907412,0.693138033939733,0.784349769176855,1.46139224653261,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0.512900250232778,1.31205858279882,0.650756789328606,0,0.0915694648183434,0.082509499920588,0.574265537996172,0.650060246036521,3.21367859688319,0.096670718292122,0.616194468458578,0.460511024178389,0,0.214840489736547,0,0.426133137080504,0.0890320356467374,1.15699440752685,0.768760269460425,0.255225424989168,0.10115778085555,0,0,0,1.23213432070436,1.59691809095107,0,0.55597265731176,0.143124886741991,0.372158369359667,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.202182481573316,0,4.63384301862879,0,6.58026422004468,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0,3.3171948762061,0,0,1.31178950409327,0.405820753925408,0,0.281695602532241,0,0,0.7133421029625,0,0.211107635297664,0.658589785919804,0,0,1.05844323998063,0,0,0,0,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06697207638852,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,1.70690172428249,1.01701460117107,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.01792645206503,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0.782658475728359,0.728341138602278,0.394584402849391,0,0,0,0,0.103688191397247,0.664653872707185,1.323967823502,0,0,0,0,1.21491816834592,1.7638631534588,0.609414446062818,0.17472666824203,0,0,0,0.0821154570532092,0.290967049465258,0,0,0,0.19871461170299,0,0.391102765469606,0.320635281006135,0.426905989478705,0.799238438328521,0,0.343609788497747,0,0,0.49701014226173,0,0,0,0.407992870545287,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0.670869375198532,0.157611414598396,0,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,10.1164302470214,0,0.144921028610825,0.298509605773748,0,0.554805861502613,0.189403005275089,0,0,0,0.302461847526478,0.15543720058278,0.295710299979268,1.75226443880073,1.79921244865442,0.621051827505038,2.07353103920428,0.265841714557995,0.521745061811734,4.95850109690821,17.8978449719334,1.22061219961398,0.727394636810238,2.47044281197723,0,1.59238355479446,0,1.03018711554838,0.673498977531838,0,0,0.428883182749851,0.260994291965212,1.58694147858591,1.389134845943,0.244736704506468,3.58177682162975,0.926404341482917,6.35923743778251,2.65033718918822,8.29530364564934,0,0,0.345430341731199,0,0,0,0,0,0,0,1.90180911022764,0,0,0,0,0.184105950251841,0.419638523158333,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,2.94443155503077,0.11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| ||
|short_description=p@chr15:101455438..101455471,+ | |||
}} | }} |
Latest revision as of 00:18, 25 July 2015
Short description: | p@chr15:101455438..101455471, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:101455438..101455471, + |
Coexpression cluster: | C908_Mesothelial_mesenchymal_squamous_mesothelioma_mucinous_oral_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 7.79e-16 | 19 |
squamous epithelial cell | 1.60e-09 | 63 |
mesodermal cell | 2.93e-08 | 121 |
vascular associated smooth muscle cell | 5.18e-08 | 32 |
aortic smooth muscle cell | 7.74e-08 | 10 |
smooth muscle cell of the internal thoracic artery | 2.69e-07 | 2 |
epithelial cell | 8.50e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
female gonad | 5.85e-11 | 13 |
external genitalia | 4.92e-10 | 22 |
reproductive structure | 1.80e-08 | 59 |
reproductive system | 1.80e-08 | 59 |
gonad | 2.26e-08 | 21 |
indifferent external genitalia | 2.26e-08 | 21 |
indifferent gonad | 2.26e-08 | 21 |
gonad primordium | 2.26e-08 | 21 |
blood vessel smooth muscle | 7.74e-08 | 10 |
arterial system smooth muscle | 7.74e-08 | 10 |
artery smooth muscle tissue | 7.74e-08 | 10 |
aorta smooth muscle tissue | 7.74e-08 | 10 |
female reproductive organ | 7.89e-08 | 37 |
female reproductive system | 7.89e-08 | 37 |
body cavity or lining | 8.46e-08 | 49 |
left ovary | 9.41e-08 | 4 |
internal thoracic artery | 2.69e-07 | 2 |
body cavity | 3.67e-07 | 46 |
female organism | 7.42e-07 | 41 |
reproductive organ | 9.61e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.59e-13 | 14 |
female reproductive organ cancer | 6.03e-10 | 27 |
reproductive organ cancer | 4.03e-09 | 29 |
squamous cell carcinoma | 9.54e-08 | 14 |