FFCP PHASE1:Hg19::chr14:99635843..99635847,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:99635843..99635847,- | |||
|coexpression_cluster_id=C588 | |||
|description=CAGE_peak_at_chr14:99635843..99635847,- | |description=CAGE_peak_at_chr14:99635843..99635847,- | ||
|id=chr14:99635843..99635847,- | |id=chr14:99635843..99635847,- | ||
|ontology_enrichment_celltype=CL:0000084!3.65e-24!25;CL:0000827!3.65e-24!25;CL:0000791!3.48e-16!18;CL:0000789!3.48e-16!18;CL:0002420!3.48e-16!18;CL:0002419!3.48e-16!18;CL:0000790!3.48e-16!18;CL:0000838!1.74e-12!52;CL:0000542!4.27e-12!53;CL:0000051!4.27e-12!53;CL:0000625!6.38e-10!11;CL:0000624!9.54e-07!6 | |ontology_enrichment_celltype=CL:0000084!3.65e-24!25;CL:0000827!3.65e-24!25;CL:0000791!3.48e-16!18;CL:0000789!3.48e-16!18;CL:0002420!3.48e-16!18;CL:0002419!3.48e-16!18;CL:0000790!3.48e-16!18;CL:0000838!1.74e-12!52;CL:0000542!4.27e-12!53;CL:0000051!4.27e-12!53;CL:0000625!6.38e-10!11;CL:0000624!9.54e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.97e-19;25!CL:0000623;2.63e-16;3!CL:0000791;1.89e-13;18!CL:0000789;1.89e-13;18!CL:0002419;1.89e-13;18!CL:0000624;1.12e-08;6!CL:0000625;1.13e-07;11!CL:0000226;1.34e-07;3!CL:0000842;1.34e-07;3!CL:0000542;2.12e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.84e-19,25;CL:0000827,7.84e-19,25;CL:0000623,2.78e-16,3;CL:0000825,2.78e-16,3;CL:0000838,4.78e-14,52;CL:0000542,9.91e-14,53;CL:0000051,9.91e-14,53;CL:0000791,1.98e-13,18;CL:0000789,1.98e-13,18;CL:0002420,1.98e-13,18;CL:0002419,1.98e-13,18;CL:0000790,1.98e-13,18;CL:0000624,1.11e-08,6;CL:0002087,8.97e-08,115;CL:0000625,1.19e-07,11;CL:0000226,1.80e-07,3;CL:0000842,1.80e-07,3;CL:0000738,5.10e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;1.89e-13;18!CL:0000051;2.12e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.64e-10!15;UBERON:0000179!3.64e-10!15;UBERON:0000463!3.64e-10!15;UBERON:0001893!1.60e-07!34;UBERON:0001869!2.34e-07!32;UBERON:0002780!2.66e-07!41;UBERON:0001890!2.66e-07!41;UBERON:0006240!2.66e-07!41;UBERON:0000073!4.02e-07!94;UBERON:0001016!4.02e-07!94;UBERON:0003080!5.13e-07!42;UBERON:0002791!5.62e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.41e-13;4!UBERON:0000923;8.41e-13;4!UBERON:0010316;8.41e-13;4!UBERON:0005291;8.41e-13;4!UBERON:0002050;2.49e-10;5!UBERON:0005423;2.49e-10;5!UBERON:0000178;4.05e-08;15!UBERON:0000179;4.05e-08;15!UBERON:0000463;4.05e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.32e-08,15;UBERON:0000179,5.32e-08,15;UBERON:0000463,5.32e-08,15 | |||
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| ||
|short_description=p@chr14:99635843..99635847,- | |short_description=p@chr14:99635843..99635847,- | ||
}} | }} |
Latest revision as of 00:11, 25 July 2015
Short description: | p@chr14:99635843..99635847, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:99635843..99635847, - |
Coexpression cluster: | C588_CD4_neuroectodermal_thymus_CD8_neuroepithelioma_Hodgkin_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.84e-19 | 25 |
pro-T cell | 7.84e-19 | 25 |
natural killer cell | 2.78e-16 | 3 |
pro-NK cell | 2.78e-16 | 3 |
lymphoid lineage restricted progenitor cell | 4.78e-14 | 52 |
lymphocyte | 9.91e-14 | 53 |
common lymphoid progenitor | 9.91e-14 | 53 |
mature alpha-beta T cell | 1.98e-13 | 18 |
alpha-beta T cell | 1.98e-13 | 18 |
immature T cell | 1.98e-13 | 18 |
mature T cell | 1.98e-13 | 18 |
immature alpha-beta T cell | 1.98e-13 | 18 |
CD4-positive, alpha-beta T cell | 1.11e-08 | 6 |
nongranular leukocyte | 8.97e-08 | 115 |
CD8-positive, alpha-beta T cell | 1.19e-07 | 11 |
single nucleate cell | 1.80e-07 | 3 |
mononuclear cell | 1.80e-07 | 3 |
leukocyte | 5.10e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 5.32e-08 | 15 |
haemolymphatic fluid | 5.32e-08 | 15 |
organism substance | 5.32e-08 | 15 |