FFCP PHASE1:Hg19::chr14:95088671..95088704,+: Difference between revisions
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|id=chr14:95088671..95088704,+
|short_description=p@chr14:95088671..95088704,+
|description=CAGE_peak_at_chr14:95088671..95088704,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:95088671..95088704,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr14:95088671..95088704,+ | |||
|id=chr14:95088671..95088704,+ | |||
|ontology_enrichment_celltype=CL:0002564!7.40e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.98e-14;3!CL:0000737;4.68e-11;4!CL:0000182;2.48e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.73e-14,3;CL:0000513,1.73e-14,3;CL:0000737,4.23e-11,4;CL:0000182,2.48e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000513;1.98e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-31!115;UBERON:0001049!1.41e-15!57;UBERON:0005068!1.41e-15!57;UBERON:0006241!1.41e-15!57;UBERON:0007135!1.41e-15!57;UBERON:0003075!3.58e-13!86;UBERON:0007284!3.58e-13!86;UBERON:0005743!1.09e-12!86;UBERON:0001017!1.33e-12!82;UBERON:0002298!1.50e-12!8;UBERON:0002346!3.05e-12!90;UBERON:0000025!4.72e-12!194;UBERON:0002616!6.01e-12!59;UBERON:0002308!2.35e-11!9;UBERON:0000125!2.35e-11!9;UBERON:0000073!8.71e-11!94;UBERON:0001016!8.71e-11!94;UBERON:0004111!2.24e-10!241;UBERON:0000955!4.06e-10!69;UBERON:0006238!4.06e-10!69;UBERON:0003076!7.76e-10!15;UBERON:0003057!7.76e-10!15;UBERON:0000477!2.15e-09!286;UBERON:0002020!1.79e-08!34;UBERON:0003528!1.79e-08!34;UBERON:0003080!2.30e-08!42;UBERON:0001893!2.89e-08!34;UBERON:0000475!4.21e-08!365;UBERON:0009854!5.80e-08!23;UBERON:0009663!6.13e-08!7;UBERON:0000483!1.55e-07!309;UBERON:0002791!1.95e-07!33;UBERON:0002780!2.06e-07!41;UBERON:0001890!2.06e-07!41;UBERON:0006240!2.06e-07!41;UBERON:0000119!2.44e-07!312;UBERON:0002240!2.89e-07!3;UBERON:0006331!3.21e-07!3;UBERON:0001896!5.10e-07!3;UBERON:0005290!5.10e-07!3;UBERON:0010096!5.10e-07!3;UBERON:0005174!5.86e-07!5;UBERON:0001137!5.86e-07!5;UBERON:0008835!7.31e-07!22;UBERON:0003894!7.31e-07!22;UBERON:0002242!7.40e-07!3;UBERON:0003068!7.40e-07!3;UBERON:0002328!7.40e-07!3;UBERON:0004880!7.40e-07!3;UBERON:0009856!8.71e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.72e-13;19!UBERON:0006925;1.72e-13;19!UBERON:0002365;3.44e-11;31!UBERON:0002330;3.44e-11;31!UBERON:0000029;3.81e-11;1!UBERON:0002423;3.19e-10;25!UBERON:0000949;7.92e-09;43!UBERON:0005172;1.39e-07;52!UBERON:0005173;1.39e-07;52!UBERON:0002368;3.71e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.72e-13,19;UBERON:0006925,1.72e-13,19;UBERON:0008836,1.72e-13,19;UBERON:0008835,1.23e-11,22;UBERON:0003894,1.23e-11,22;UBERON:0002365,1.79e-11,31;UBERON:0002330,1.79e-11,31;UBERON:0000029,2.68e-11,1;UBERON:0009854,4.01e-11,23;UBERON:0000949,1.82e-10,45;UBERON:0007499,3.19e-10,25;UBERON:0009497,3.19e-10,25;UBERON:0000015,3.19e-10,25;UBERON:0002423,3.19e-10,25;UBERON:0006235,3.19e-10,25;UBERON:0004161,3.19e-10,25;UBERON:0002417,7.85e-10,60;UBERON:0000916,7.85e-10,60;UBERON:0009856,8.00e-10,26;UBERON:0005177,1.51e-08,101;UBERON:0005172,1.59e-08,54;UBERON:0005173,1.59e-08,54;UBERON:0002368,2.98e-07,35 | |||
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| ||
|short_description=p@chr14:95088671..95088704,+ | |||
}} | }} |
Latest revision as of 00:02, 25 July 2015
Short description: | p@chr14:95088671..95088704, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:95088671..95088704, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.73e-14 | 3 |
cardiac muscle myoblast | 1.73e-14 | 3 |
striated muscle cell | 4.23e-11 | 4 |
hepatocyte | 2.48e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.72e-13 | 19 |
digestive gland | 1.72e-13 | 19 |
liver bud | 1.72e-13 | 19 |
hepatic diverticulum | 1.23e-11 | 22 |
liver primordium | 1.23e-11 | 22 |
exocrine gland | 1.79e-11 | 31 |
exocrine system | 1.79e-11 | 31 |
lymph node | 2.68e-11 | 1 |
digestive tract diverticulum | 4.01e-11 | 23 |
endocrine system | 1.82e-10 | 45 |
epithelial sac | 3.19e-10 | 25 |
epithelium of foregut-midgut junction | 3.19e-10 | 25 |
anatomical boundary | 3.19e-10 | 25 |
hepatobiliary system | 3.19e-10 | 25 |
foregut-midgut junction | 3.19e-10 | 25 |
septum transversum | 3.19e-10 | 25 |
abdominal segment of trunk | 7.85e-10 | 60 |
abdomen | 7.85e-10 | 60 |
sac | 8.00e-10 | 26 |
trunk region element | 1.51e-08 | 101 |
abdomen element | 1.59e-08 | 54 |
abdominal segment element | 1.59e-08 | 54 |
endocrine gland | 2.98e-07 | 35 |