FFCP PHASE1:Hg19::chr14:85705824..85705844,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000556016_5end | |association_with_transcript=-6bp_to_ENST00000556016_5end | ||
|cluster_id=chr14:85705824..85705844,- | |||
|description=CAGE_peak_1_at_ENST00000556016_5end | |description=CAGE_peak_1_at_ENST00000556016_5end | ||
|id=chr14:85705824..85705844,- | |id=chr14:85705824..85705844,- | ||
|ontology_enrichment_celltype=CL:0000708!1.79e-37!3;CL:0000342!5.15e-14!1;CL:0002565!5.15e-14!1;CL:0000327!1.57e-08!14;CL:0000499!1.25e-07!27 | |ontology_enrichment_celltype=CL:0000708!1.79e-37!3;CL:0000342!5.15e-14!1;CL:0002565!5.15e-14!1;CL:0000327!1.57e-08!14;CL:0000499!1.25e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000342;5.97e-34;1!CL:0002565;5.97e-34;1!CL:0002590;2.74e-12;3!CL:0002149;8.72e-07;6!CL:0002255;8.72e-07;6 | |ontology_enrichment_celltype_v019=CL:0000342;5.97e-34;1!CL:0002565;5.97e-34;1!CL:0002590;2.74e-12;3!CL:0002149;8.72e-07;6!CL:0002255;8.72e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000342,7.06e-34,1;CL:0002565,7.06e-34,1;CL:0002590,3.24e-12,3;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;1.96e-12;3!DOID:3908;5.54e-08;5!DOID:3001;8.72e-07;6 | |ontology_enrichment_disease_v019=DOID:4556;1.96e-12;3!DOID:3908;5.54e-08;5!DOID:3001;8.72e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,2.07e-12,3;DOID:3908,5.73e-08,5;DOID:3001,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003210!1.79e-37!3;UBERON:0002506!5.15e-14!1;UBERON:0001769!5.15e-14!1;UBERON:0000488!1.95e-13!4;UBERON:0002200!7.72e-11!11;UBERON:0006876!7.72e-11!11;UBERON:0007625!9.76e-11!11;UBERON:0002203!2.89e-09!6;UBERON:0001768!2.89e-09!6;UBERON:0001801!1.49e-08!14 | |ontology_enrichment_uberon=UBERON:0003210!1.79e-37!3;UBERON:0002506!5.15e-14!1;UBERON:0001769!5.15e-14!1;UBERON:0000488!1.95e-13!4;UBERON:0002200!7.72e-11!11;UBERON:0006876!7.72e-11!11;UBERON:0007625!9.76e-11!11;UBERON:0002203!2.89e-09!6;UBERON:0001768!2.89e-09!6;UBERON:0001801!1.49e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002506;5.97e-34;1!UBERON:0001769;5.97e-34;1!UBERON:0006876;5.76e-13;11!UBERON:0002369;1.96e-12;3!UBERON:0001235;1.96e-12;3!UBERON:0006858;1.96e-12;3!UBERON:0000488;1.50e-09;4!UBERON:0005284;6.78e-08;5!UBERON:0002203;8.72e-07;6!UBERON:0001768;8.72e-07;6!UBERON:0002200;8.72e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002506;5.97e-34;1!UBERON:0001769;5.97e-34;1!UBERON:0006876;5.76e-13;11!UBERON:0002369;1.96e-12;3!UBERON:0001235;1.96e-12;3!UBERON:0006858;1.96e-12;3!UBERON:0000488;1.50e-09;4!UBERON:0005284;6.78e-08;5!UBERON:0002203;8.72e-07;6!UBERON:0001768;8.72e-07;6!UBERON:0002200;8.72e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,7.06e-34,1;UBERON:0001769,7.06e-34,1;UBERON:0006876,6.49e-13,11;UBERON:0002369,1.85e-12,3;UBERON:0001235,1.85e-12,3;UBERON:0006858,1.85e-12,3;UBERON:0000488,1.57e-09,4;UBERON:0005284,7.49e-08,5;UBERON:0002203,8.97e-07,6;UBERON:0001768,8.97e-07,6;UBERON:0002200,8.97e-07,6 | |||
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|short_description=p1@ENST00000556016 | |short_description=p1@ENST00000556016 | ||
}} | }} |
Latest revision as of 23:17, 24 July 2015
Short description: | p1@ENST00000556016 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556016_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000556016_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 7.06e-34 | 1 |
iris pigment epithelial cell | 7.06e-34 | 1 |
smooth muscle cell of the brain vasculature | 3.24e-12 | 3 |
epithelial cell of uterus | 8.02e-07 | 6 |
stromal cell of endometrium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 7.06e-34 | 1 |
iris | 7.06e-34 | 1 |
vasculature of organ | 6.49e-13 | 11 |
adrenal gland | 1.85e-12 | 3 |
adrenal cortex | 1.85e-12 | 3 |
adrenal/interrenal gland | 1.85e-12 | 3 |
atypical epithelium | 1.57e-09 | 4 |
brain vasculature | 7.49e-08 | 5 |
vasculature of eye | 8.97e-07 | 6 |
uvea | 8.97e-07 | 6 |
vasculature of head | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 2.07e-12 | 3 |
non-small cell lung carcinoma | 5.73e-08 | 5 |
female reproductive endometrioid cancer | 8.02e-07 | 6 |