FFCP PHASE1:Hg19::chr14:75982124..75982133,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:75982124..75982133,+ to FFCP PHASE1:Hg19::chr14:75982124..75982133,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:75982124..75982133,+ | |||
|coexpression_cluster_id=C507 | |||
|description=CAGE_peak_at_chr14:75982124..75982133,+ | |||
|id=chr14:75982124..75982133,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.28e-46!24;CL:0000826!5.28e-46!24;CL:0000838!9.39e-28!52;CL:0000542!3.49e-27!53;CL:0000051!3.49e-27!53;CL:0002031!1.60e-17!124;CL:0000785!5.08e-17!2;CL:0000955!5.08e-17!2;CL:0000818!5.08e-17!2;CL:0000954!5.08e-17!2;CL:0000816!5.08e-17!2;CL:0000988!8.00e-16!182;CL:0000738!3.61e-15!140;CL:0002274!1.15e-14!5;CL:0000457!1.15e-14!5;CL:0002191!1.15e-14!5;CL:0000097!1.15e-14!5;CL:0000831!1.15e-14!5;CL:0002028!1.15e-14!5;CL:0000080!4.62e-13!6;CL:0002032!2.13e-12!165;CL:0000837!2.13e-12!165;CL:0002087!2.36e-12!119;CL:0000037!9.16e-12!172;CL:0000566!9.16e-12!172;CL:0000817!1.16e-11!3;CL:0000946!1.32e-09!1;CL:0000786!1.32e-09!1;CL:0000980!1.32e-09!1;CL:0000819!3.83e-09!1;CL:0000163!2.20e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000946;4.10e-23;1!CL:0000786;4.10e-23;1!CL:0000945;4.75e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.10e-23,1;CL:0000786,4.10e-23,1;CL:0000980,4.10e-23,1;CL:0000945,5.31e-15,24;CL:0000826,5.31e-15,24;CL:0000785,2.90e-12,2;CL:0000955,2.90e-12,2;CL:0000818,2.90e-12,2;CL:0000954,2.90e-12,2;CL:0000816,2.90e-12,2;CL:0000838,9.54e-11,52;CL:0000542,1.51e-10,53;CL:0000051,1.51e-10,53;CL:0000817,1.30e-08,3;CL:0000988,1.12e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;2.90e-12;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.09e-28!10;DOID:630!1.43e-09!1;DOID:0050177!1.43e-09!1;DOID:0050427!1.43e-09!1;DOID:4960!2.77e-09!1;DOID:0070004!2.77e-09!1;DOID:2355!3.25e-09!1;DOID:0060060!3.53e-09!1;DOID:0060061!3.53e-09!1;DOID:8691!3.53e-09!1;DOID:0060073!3.83e-09!1;DOID:8675!3.83e-09!1;DOID:2531!5.29e-09!51;DOID:0060083!5.29e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:630;4.10e-23;1!DOID:0050177;4.10e-23;1!DOID:0050427;4.10e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.13e-23,1;DOID:0050177,5.13e-23,1;DOID:0050427,5.13e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!4.96e-08!10;UBERON:0000358!4.96e-08!10;UBERON:0000307!4.96e-08!10;UBERON:0000091!4.96e-08!10;UBERON:0000087!4.96e-08!10;UBERON:0007806!4.96e-08!10;UBERON:0008780!4.96e-08!10;UBERON:0005728!4.96e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.11e-20;10!UBERON:0000178;7.51e-14;15!UBERON:0000179;7.51e-14;15!UBERON:0000463;7.51e-14;15!UBERON:0002390;3.35e-11;32!UBERON:0000478;6.66e-09;24!UBERON:0002106;8.31e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.79e-20,10;UBERON:0000358,1.79e-20,10;UBERON:0000307,1.79e-20,10;UBERON:0000091,1.79e-20,10;UBERON:0000087,1.79e-20,10;UBERON:0007010,1.79e-20,10;UBERON:0007806,1.79e-20,10;UBERON:0008780,1.79e-20,10;UBERON:0005728,1.79e-20,10;UBERON:0000178,6.73e-14,15;UBERON:0000179,6.73e-14,15;UBERON:0000463,6.73e-14,15;UBERON:0000478,6.22e-09,24;UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.985207073399349,0.393553906568396,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81562896929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,1.97702302314405,1.67075119208729,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09758739292209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14620108621927,0.985207073399349,0.393553906568396,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81562896929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,1.97702302314405,1.67075119208729,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09758739292209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | ||
|short_description=p@chr14:75982124..75982133,+ | |||
}} | }} |
Latest revision as of 22:53, 24 July 2015
Short description: | p@chr14:75982124..75982133, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75982124..75982133, + |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.10e-23 | 1 |
plasma cell | 4.10e-23 | 1 |
plasmablast | 4.10e-23 | 1 |
lymphocyte of B lineage | 5.31e-15 | 24 |
pro-B cell | 5.31e-15 | 24 |
mature B cell | 2.90e-12 | 2 |
pre-B-II cell | 2.90e-12 | 2 |
transitional stage B cell | 2.90e-12 | 2 |
small pre-B-II cell | 2.90e-12 | 2 |
immature B cell | 2.90e-12 | 2 |
lymphoid lineage restricted progenitor cell | 9.54e-11 | 52 |
lymphocyte | 1.51e-10 | 53 |
common lymphoid progenitor | 1.51e-10 | 53 |
precursor B cell | 1.30e-08 | 3 |
hematopoietic cell | 1.12e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.79e-20 | 10 |
blastocyst | 1.79e-20 | 10 |
blastula | 1.79e-20 | 10 |
bilaminar disc | 1.79e-20 | 10 |
inner cell mass | 1.79e-20 | 10 |
cleaving embryo | 1.79e-20 | 10 |
connecting stalk | 1.79e-20 | 10 |
inner cell mass derived epiblast | 1.79e-20 | 10 |
extraembryonic mesoderm | 1.79e-20 | 10 |
blood | 6.73e-14 | 15 |
haemolymphatic fluid | 6.73e-14 | 15 |
organism substance | 6.73e-14 | 15 |
extraembryonic structure | 6.22e-09 | 24 |
spleen | 8.31e-09 | 3 |
gastrointestinal system mesentery | 8.31e-09 | 3 |
stomach region | 8.31e-09 | 3 |
mesentery | 8.31e-09 | 3 |
gastrointestinal system serosa | 8.31e-09 | 3 |
mesentery of stomach | 8.31e-09 | 3 |
gut mesentery | 8.31e-09 | 3 |
dorsal mesentery | 8.31e-09 | 3 |
dorsal mesogastrium | 8.31e-09 | 3 |
peritoneal cavity | 8.31e-09 | 3 |
spleen primordium | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.13e-23 | 1 |
monogenic disease | 5.13e-23 | 1 |
xeroderma pigmentosum | 5.13e-23 | 1 |