FFCP PHASE1:Hg19::chr14:75743949..75743996,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:75743949..75743996,+ to FFCP PHASE1:Hg19::chr14:75743949..75743996,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:75743949..75743996,+ | |||
|coexpression_cluster_id=C815 | |||
|description=CAGE_peak_at_chr14:75743949..75743996,+ | |||
|id=chr14:75743949..75743996,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.16e-27!42;CL:0000860!6.28e-25!45;CL:0000766!4.86e-19!76;CL:0000557!8.74e-16!71;CL:0002009!5.22e-15!65;CL:0000738!1.45e-14!140;CL:0002194!4.09e-14!63;CL:0000576!4.09e-14!63;CL:0000040!4.09e-14!63;CL:0000559!4.09e-14!63;CL:0000839!4.36e-14!70;CL:0002087!1.48e-10!119;CL:0002031!1.57e-10!124;CL:0000763!1.18e-09!112;CL:0000049!1.18e-09!112;CL:0000037!5.70e-09!172;CL:0000566!5.70e-09!172;CL:0002032!7.89e-08!165;CL:0000837!7.89e-08!165;CL:0000988!1.57e-07!182;CL:0002393!2.19e-07!9;CL:0002397!2.19e-07!9;CL:0000094!5.33e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.46e-25;33!CL:0002057;6.46e-25;33!CL:0000576;6.77e-19;48!CL:0000473;6.80e-16;39!CL:0000234;6.80e-16;39!CL:0000766;1.42e-14;69!CL:0000094;1.12e-08;8!CL:0002087;4.94e-07;104!CL:0002393;7.00e-07;6!CL:0002397;7.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.02e-35,42;CL:0002057,4.02e-35,42;CL:0000766,3.86e-29,72;CL:0000473,4.87e-28,48;CL:0000234,4.87e-28,48;CL:0000557,1.60e-24,67;CL:0002009,6.48e-23,61;CL:0002194,1.15e-21,59;CL:0000576,1.15e-21,59;CL:0000040,1.15e-21,59;CL:0000559,1.15e-21,59;CL:0000839,2.57e-21,66;CL:0000738,3.44e-21,136;CL:0002087,9.19e-16,115;CL:0002031,9.98e-16,120;CL:0000763,3.39e-15,108;CL:0000049,3.39e-15,108;CL:0000037,8.31e-14,168;CL:0002032,2.83e-12,161;CL:0000837,2.83e-12,161;CL:0000988,4.48e-12,177;CL:0002393,3.58e-09,9;CL:0002397,3.58e-09,9;CL:0000094,1.13e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.61e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.72e-17!102;UBERON:0003061!4.72e-17!102;UBERON:0001474!3.61e-15!86;UBERON:0002371!1.14e-14!80;UBERON:0002193!5.02e-13!112;UBERON:0004765!1.56e-11!101;UBERON:0001434!1.56e-11!101;UBERON:0002405!1.45e-08!115;UBERON:0007023!6.04e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-25,98;UBERON:0003061,1.30e-25,98;UBERON:0004765,2.63e-24,90;UBERON:0002371,8.07e-24,76;UBERON:0001474,9.62e-24,82;UBERON:0002193,1.29e-20,108;UBERON:0001434,1.78e-20,100;UBERON:0002405,4.37e-16,93 | |||
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| ||
|short_description=p@chr14:75743949..75743996,+ | |||
}} | }} |
Latest revision as of 22:49, 24 July 2015
Short description: | p@chr14:75743949..75743996, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75743949..75743996, + |
Coexpression cluster: | C815_Basophils_Eosinophils_CD14_Mast_Peripheral_CD34_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.02e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.02e-35 | 42 |
myeloid leukocyte | 3.86e-29 | 72 |
defensive cell | 4.87e-28 | 48 |
phagocyte | 4.87e-28 | 48 |
granulocyte monocyte progenitor cell | 1.60e-24 | 67 |
macrophage dendritic cell progenitor | 6.48e-23 | 61 |
monopoietic cell | 1.15e-21 | 59 |
monocyte | 1.15e-21 | 59 |
monoblast | 1.15e-21 | 59 |
promonocyte | 1.15e-21 | 59 |
myeloid lineage restricted progenitor cell | 2.57e-21 | 66 |
leukocyte | 3.44e-21 | 136 |
nongranular leukocyte | 9.19e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.98e-16 | 120 |
myeloid cell | 3.39e-15 | 108 |
common myeloid progenitor | 3.39e-15 | 108 |
hematopoietic stem cell | 8.31e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.83e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.83e-12 | 161 |
hematopoietic cell | 4.48e-12 | 177 |
intermediate monocyte | 3.58e-09 | 9 |
CD14-positive, CD16-positive monocyte | 3.58e-09 | 9 |
granulocyte | 1.13e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.30e-25 | 98 |
blood island | 1.30e-25 | 98 |
skeletal element | 2.63e-24 | 90 |
bone marrow | 8.07e-24 | 76 |
bone element | 9.62e-24 | 82 |
hemolymphoid system | 1.29e-20 | 108 |
skeletal system | 1.78e-20 | 100 |
immune system | 4.37e-16 | 93 |