FFCP PHASE1:Hg19::chr14:72906442..72906453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:72906442..72906453,- | |||
|coexpression_cluster_id=C1100 | |||
|description=CAGE_peak_at_chr14:72906442..72906453,- | |description=CAGE_peak_at_chr14:72906442..72906453,- | ||
|id=chr14:72906442..72906453,- | |id=chr14:72906442..72906453,- | ||
|ontology_enrichment_celltype=CL:0002127!7.03e-13!1;CL:0000914!7.03e-13!1;CL:0000911!7.03e-13!1;CL:0000814!7.03e-13!1;CL:0002042!7.03e-13!1;CL:0002039!7.03e-13!1;CL:0002040!7.03e-13!1;CL:0002041!7.03e-13!1;CL:0000893!4.56e-07!2;CL:0002489!4.56e-07!2;CL:0000809!4.56e-07!2;CL:0000808!4.56e-07!2;CL:0000894!4.56e-07!2;CL:0000806!4.56e-07!2;CL:0000807!4.56e-07!2;CL:0000805!4.56e-07!2;CL:0002425!4.56e-07!2;CL:0001014!7.61e-07!2;CL:0001016!7.61e-07!2 | |ontology_enrichment_celltype=CL:0002127!7.03e-13!1;CL:0000914!7.03e-13!1;CL:0000911!7.03e-13!1;CL:0000814!7.03e-13!1;CL:0002042!7.03e-13!1;CL:0002039!7.03e-13!1;CL:0002040!7.03e-13!1;CL:0002041!7.03e-13!1;CL:0000893!4.56e-07!2;CL:0002489!4.56e-07!2;CL:0000809!4.56e-07!2;CL:0000808!4.56e-07!2;CL:0000894!4.56e-07!2;CL:0000806!4.56e-07!2;CL:0000807!4.56e-07!2;CL:0000805!4.56e-07!2;CL:0002425!4.56e-07!2;CL:0001014!7.61e-07!2;CL:0001016!7.61e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.19e-23;1!CL:0000911;1.19e-23;1!CL:0000814;1.19e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.07e-23,1;CL:0000914,1.07e-23,1;CL:0000911,1.07e-23,1;CL:0000814,1.07e-23,1;CL:0002042,1.07e-23,1;CL:0002039,1.07e-23,1;CL:0002040,1.07e-23,1;CL:0002041,1.07e-23,1;CL:0000893,1.48e-12,2;CL:0002489,1.48e-12,2;CL:0000809,1.48e-12,2;CL:0000808,1.48e-12,2;CL:0000894,1.48e-12,2;CL:0000806,1.48e-12,2;CL:0000807,1.48e-12,2;CL:0000805,1.48e-12,2;CL:0002425,1.48e-12,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.56e-12;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001154!2.46e-12!1;UBERON:0001153!2.46e-12!1;UBERON:0002370!4.57e-12!4;UBERON:0005058!4.57e-12!4;UBERON:0009113!4.57e-12!4;UBERON:0003295!4.57e-12!4;UBERON:0005562!4.57e-12!4;UBERON:0003351!2.43e-08!6;UBERON:0004177!2.86e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.50e-07,4;UBERON:0005058,6.50e-07,4;UBERON:0009113,6.50e-07,4;UBERON:0003295,6.50e-07,4;UBERON:0005562,6.50e-07,4 | |||
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|short_description=p@chr14:72906442..72906453,- | |short_description=p@chr14:72906442..72906453,- | ||
}} | }} |
Latest revision as of 22:29, 24 July 2015
Short description: | p@chr14:72906442..72906453, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:72906442..72906453, - |
Coexpression cluster: | C1100_CD4_NK_anaplastic_acute_Hodgkin_adult_cord |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.07e-23 | 1 |
immature NK T cell | 1.07e-23 | 1 |
effector T cell | 1.07e-23 | 1 |
mature NK T cell | 1.07e-23 | 1 |
immature NK T cell stage IV | 1.07e-23 | 1 |
immature NK T cell stage I | 1.07e-23 | 1 |
immature NK T cell stage II | 1.07e-23 | 1 |
immature NK T cell stage III | 1.07e-23 | 1 |
thymocyte | 1.48e-12 | 2 |
double negative thymocyte | 1.48e-12 | 2 |
double-positive, alpha-beta thymocyte | 1.48e-12 | 2 |
DN4 thymocyte | 1.48e-12 | 2 |
DN1 thymic pro-T cell | 1.48e-12 | 2 |
DN2 thymocyte | 1.48e-12 | 2 |
DN3 thymocyte | 1.48e-12 | 2 |
immature single positive thymocyte | 1.48e-12 | 2 |
early T lineage precursor | 1.48e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.50e-07 | 4 |
hemolymphoid system gland | 6.50e-07 | 4 |
thymic region | 6.50e-07 | 4 |
pharyngeal gland | 6.50e-07 | 4 |
thymus primordium | 6.50e-07 | 4 |