FFCP PHASE1:Hg19::chr14:71789545..71789557,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:71789545..71789557,+ | |||
|description=CAGE_peak_at_chr14:71789545..71789557,+ | |description=CAGE_peak_at_chr14:71789545..71789557,+ | ||
|id=chr14:71789545..71789557,+ | |id=chr14:71789545..71789557,+ | ||
|ontology_enrichment_celltype=CL:0000860!3.99e-35!45;CL:0002057!2.90e-33!42;CL:0000766!9.78e-29!76;CL:0000738!1.38e-27!140;CL:0002009!4.58e-23!65;CL:0002194!5.39e-23!63;CL:0000576!5.39e-23!63;CL:0000040!5.39e-23!63;CL:0000559!5.39e-23!63;CL:0000557!2.03e-22!71;CL:0000839!8.91e-22!70;CL:0002087!4.96e-21!119;CL:0002031!3.24e-20!124;CL:0002032!7.04e-19!165;CL:0000837!7.04e-19!165;CL:0000037!8.14e-19!172;CL:0000566!8.14e-19!172;CL:0000763!2.04e-18!112;CL:0000049!2.04e-18!112;CL:0000988!1.64e-16!182;CL:0002393!1.46e-10!9;CL:0002397!1.46e-10!9;CL:0000094!7.63e-08!8;CL:0000134!9.36e-08!358;CL:0002320!3.79e-07!365;CL:0000048!4.32e-07!430 | |ontology_enrichment_celltype=CL:0000860!3.99e-35!45;CL:0002057!2.90e-33!42;CL:0000766!9.78e-29!76;CL:0000738!1.38e-27!140;CL:0002009!4.58e-23!65;CL:0002194!5.39e-23!63;CL:0000576!5.39e-23!63;CL:0000040!5.39e-23!63;CL:0000559!5.39e-23!63;CL:0000557!2.03e-22!71;CL:0000839!8.91e-22!70;CL:0002087!4.96e-21!119;CL:0002031!3.24e-20!124;CL:0002032!7.04e-19!165;CL:0000837!7.04e-19!165;CL:0000037!8.14e-19!172;CL:0000566!8.14e-19!172;CL:0000763!2.04e-18!112;CL:0000049!2.04e-18!112;CL:0000988!1.64e-16!182;CL:0002393!1.46e-10!9;CL:0002397!1.46e-10!9;CL:0000094!7.63e-08!8;CL:0000134!9.36e-08!358;CL:0002320!3.79e-07!365;CL:0000048!4.32e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.96e-48;33!CL:0002057;1.96e-48;33!CL:0000473;3.69e-37;39!CL:0000234;3.69e-37;39!CL:0000576;9.97e-33;48!CL:0000766;1.41e-25;69!CL:0000775;5.64e-18;3!CL:0000763;9.12e-12;100!CL:0000094;1.55e-11;8!CL:0000738;2.82e-11;136!CL:0002087;8.89e-11;104!CL:0000081;2.07e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.13e-58,42;CL:0002057,8.13e-58,42;CL:0000473,5.40e-50,48;CL:0000234,5.40e-50,48;CL:0000766,3.43e-49,72;CL:0002194,4.87e-39,59;CL:0000576,4.87e-39,59;CL:0000040,4.87e-39,59;CL:0000559,4.87e-39,59;CL:0000839,4.81e-38,66;CL:0002009,1.26e-37,61;CL:0000557,2.06e-37,67;CL:0000738,7.20e-35,136;CL:0000763,1.07e-33,108;CL:0000049,1.07e-33,108;CL:0002032,1.59e-28,161;CL:0000837,1.59e-28,161;CL:0002031,2.96e-27,120;CL:0000037,4.38e-27,168;CL:0002087,3.03e-26,115;CL:0000988,2.13e-25,177;CL:0000775,3.13e-18,3;CL:0000094,1.22e-11,8;CL:0000134,1.90e-10,354;CL:0002320,4.06e-10,361;CL:0000219,5.88e-09,386;CL:0000081,1.75e-08,11;CL:0000034,7.32e-08,441;CL:0000048,1.55e-07,427;CL:0000723,2.43e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-44;42!CL:0000049;4.20e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.39e-07,1;DOID:0050177,7.39e-07,1;DOID:0050427,7.39e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.68e-19!80;UBERON:0002390!7.65e-18!102;UBERON:0003061!7.65e-18!102;UBERON:0001474!9.00e-17!86;UBERON:0002193!1.78e-15!112;UBERON:0002405!1.94e-14!115;UBERON:0004765!1.27e-13!101;UBERON:0001434!1.27e-13!101;UBERON:0002204!4.08e-09!167;UBERON:0003081!2.31e-07!216;UBERON:0002384!5.58e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.87e-32,76;UBERON:0001474,9.51e-30,82;UBERON:0004765,1.08e-26,90;UBERON:0002405,1.11e-25,93;UBERON:0002390,3.92e-24,98;UBERON:0003061,3.92e-24,98;UBERON:0001434,1.48e-23,100;UBERON:0002193,1.84e-21,108;UBERON:0002204,3.51e-12,167;UBERON:0003081,3.39e-10,203;UBERON:0002384,1.14e-09,371;UBERON:0002363,8.75e-07,1;UBERON:0007645,8.75e-07,1;UBERON:0007647,8.75e-07,1;UBERON:0010115,8.75e-07,1 | |||
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|short_description=p@chr14:71789545..71789557,+ | |short_description=p@chr14:71789545..71789557,+ | ||
}} | }} |
Latest revision as of 22:26, 24 July 2015
Short description: | p@chr14:71789545..71789557, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:71789545..71789557, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.13e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.13e-58 | 42 |
defensive cell | 5.40e-50 | 48 |
phagocyte | 5.40e-50 | 48 |
myeloid leukocyte | 3.43e-49 | 72 |
monopoietic cell | 4.87e-39 | 59 |
monocyte | 4.87e-39 | 59 |
monoblast | 4.87e-39 | 59 |
promonocyte | 4.87e-39 | 59 |
myeloid lineage restricted progenitor cell | 4.81e-38 | 66 |
macrophage dendritic cell progenitor | 1.26e-37 | 61 |
granulocyte monocyte progenitor cell | 2.06e-37 | 67 |
leukocyte | 7.20e-35 | 136 |
myeloid cell | 1.07e-33 | 108 |
common myeloid progenitor | 1.07e-33 | 108 |
hematopoietic oligopotent progenitor cell | 1.59e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-28 | 161 |
hematopoietic lineage restricted progenitor cell | 2.96e-27 | 120 |
hematopoietic stem cell | 4.38e-27 | 168 |
nongranular leukocyte | 3.03e-26 | 115 |
hematopoietic cell | 2.13e-25 | 177 |
neutrophil | 3.13e-18 | 3 |
granulocyte | 1.22e-11 | 8 |
mesenchymal cell | 1.90e-10 | 354 |
connective tissue cell | 4.06e-10 | 361 |
motile cell | 5.88e-09 | 386 |
blood cell | 1.75e-08 | 11 |
stem cell | 7.32e-08 | 441 |
multi fate stem cell | 1.55e-07 | 427 |
somatic stem cell | 2.43e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.87e-32 | 76 |
bone element | 9.51e-30 | 82 |
skeletal element | 1.08e-26 | 90 |
immune system | 1.11e-25 | 93 |
hematopoietic system | 3.92e-24 | 98 |
blood island | 3.92e-24 | 98 |
skeletal system | 1.48e-23 | 100 |
hemolymphoid system | 1.84e-21 | 108 |
musculoskeletal system | 3.51e-12 | 167 |
lateral plate mesoderm | 3.39e-10 | 203 |
connective tissue | 1.14e-09 | 371 |
dura mater | 8.75e-07 | 1 |
future meninx | 8.75e-07 | 1 |
ectomeninx | 8.75e-07 | 1 |
future dura mater | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.39e-07 | 1 |
monogenic disease | 7.39e-07 | 1 |
xeroderma pigmentosum | 7.39e-07 | 1 |