FFCP PHASE1:Hg19::chr14:68040603..68040607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:68040603..68040607,+ | |||
|description=CAGE_peak_at_chr14:68040603..68040607,+ | |description=CAGE_peak_at_chr14:68040603..68040607,+ | ||
|id=chr14:68040603..68040607,+ | |id=chr14:68040603..68040607,+ | ||
|ontology_enrichment_celltype=CL:1000507;2.31e-12;10!CL:1000494;2.31e-12;10!CL:0002567;7.07e-11;3!CL:1000449;1.45e-08;15!CL:1000497;1.15e-07;17!CL:0002518;1.15e-07;17 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:1000507;2.31e-12;10!CL:1000494;2.31e-12;10!CL:0002567;7.07e-11;3!CL:1000449;1.45e-08;15!CL:1000497;1.15e-07;17!CL:0002518;1.15e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.12e-12,10;CL:1000494,2.12e-12,10;CL:0002567,7.42e-11,3;CL:1000449,1.37e-08,15;CL:1000497,1.09e-07,17;CL:0002518,1.09e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.37e-29;1!UBERON:0009117;2.81e-12;10!UBERON:0005564;2.81e-12;10!UBERON:0003056;9.90e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0005162;8.46e-57;2!UBERON:0000122;8.46e-57;2!UBERON:0002336;2.37e-29;1!UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0011215;2.37e-29;1!UBERON:0001018;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0002473;2.37e-29;1!UBERON:0005340;2.37e-29;1!UBERON:0003544;2.37e-29;1!UBERON:0005970;2.37e-29;1!UBERON:0002316;2.37e-29;1!UBERON:0001020;2.37e-29;1!UBERON:0002437;2.37e-29;1!UBERON:0003714;2.05e-15;2!UBERON:0000473;4.37e-15;8!UBERON:0004211;2.31e-12;10!UBERON:0009773;2.31e-12;10!UBERON:0001231;2.31e-12;10!UBERON:0004810;2.31e-12;10!UBERON:0003135;2.98e-11;11!UBERON:0006555;1.45e-08;15!UBERON:0004819;1.45e-08;15!UBERON:0001285;1.45e-08;15!UBERON:0007684;1.45e-08;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-18!115;UBERON:0001049!4.51e-16!57;UBERON:0005068!4.51e-16!57;UBERON:0006241!4.51e-16!57;UBERON:0007135!4.51e-16!57;UBERON:0001017!4.36e-14!82;UBERON:0005743!4.44e-14!86;UBERON:0003075!2.12e-13!86;UBERON:0007284!2.12e-13!86;UBERON:0000073!3.84e-13!94;UBERON:0001016!3.84e-13!94;UBERON:0000955!1.12e-12!69;UBERON:0006238!1.12e-12!69;UBERON:0002346!1.89e-12!90;UBERON:0002616!1.97e-12!59;UBERON:0001893!4.78e-10!34;UBERON:0003076!6.98e-10!15;UBERON:0003057!6.98e-10!15;UBERON:0000033!1.02e-09!123;UBERON:0002020!1.16e-09!34;UBERON:0003528!1.16e-09!34;UBERON:0000064!2.52e-09!219;UBERON:0004732!2.82e-09!13;UBERON:0001869!3.17e-09!32;UBERON:0002780!4.79e-09!41;UBERON:0001890!4.79e-09!41;UBERON:0006240!4.79e-09!41;UBERON:0002791!6.35e-09!33;UBERON:0002298!6.54e-09!8;UBERON:0000153!6.96e-09!129;UBERON:0007811!6.96e-09!129;UBERON:0003080!9.66e-09!42;UBERON:0002619!1.01e-08!22;UBERON:0004121!2.16e-08!169;UBERON:0003056!2.89e-08!61;UBERON:0001950!4.03e-08!20;UBERON:0000924!5.51e-08!173;UBERON:0006601!5.51e-08!173;UBERON:0004733!1.22e-07!12;UBERON:0002028!1.22e-07!12;UBERON:0007277!1.22e-07!12;UBERON:0000956!1.97e-07!25;UBERON:0000203!1.97e-07!25;UBERON:0001896!2.08e-07!3;UBERON:0005290!2.08e-07!3;UBERON:0010096!2.08e-07!3;UBERON:0000062!6.02e-07!511;UBERON:0000489!6.97e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;8.46e-57;2!UBERON:0000122;8.46e-57;2!UBERON:0002336;2.37e-29;1!UBERON:0000941;2.37e-29;1!UBERON:0001785;2.37e-29;1!UBERON:0002464;2.37e-29;1!UBERON:0004904;2.37e-29;1!UBERON:0011215;2.37e-29;1!UBERON:0001018;2.37e-29;1!UBERON:0001021;2.37e-29;1!UBERON:0002473;2.37e-29;1!UBERON:0005340;2.37e-29;1!UBERON:0003544;2.37e-29;1!UBERON:0005970;2.37e-29;1!UBERON:0002316;2.37e-29;1!UBERON:0001020;2.37e-29;1!UBERON:0002437;2.37e-29;1!UBERON:0003714;2.05e-15;2!UBERON:0000473;4.37e-15;8!UBERON:0004211;2.31e-12;10!UBERON:0009773;2.31e-12;10!UBERON:0001231;2.31e-12;10!UBERON:0004810;2.31e-12;10!UBERON:0003135;2.98e-11;11!UBERON:0006555;1.45e-08;15!UBERON:0004819;1.45e-08;15!UBERON:0001285;1.45e-08;15!UBERON:0007684;1.45e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.13e-56,2;UBERON:0000122,1.13e-56,2;UBERON:0000941,2.37e-29,1;UBERON:0001785,2.37e-29,1;UBERON:0002464,2.37e-29,1;UBERON:0004904,2.37e-29,1;UBERON:0001021,2.37e-29,1;UBERON:0003902,2.37e-29,1;UBERON:0005425,2.37e-29,1;UBERON:0002336,3.16e-29,1;UBERON:0011215,3.16e-29,1;UBERON:0001018,3.16e-29,1;UBERON:0002473,3.16e-29,1;UBERON:0005340,3.16e-29,1;UBERON:0003544,3.16e-29,1;UBERON:0005970,3.16e-29,1;UBERON:0002316,3.16e-29,1;UBERON:0001020,3.16e-29,1;UBERON:0002437,3.16e-29,1;UBERON:0003714,2.05e-15,2;UBERON:0000473,4.37e-15,8;UBERON:0004810,2.12e-12,10;UBERON:0003135,2.98e-11,11;UBERON:0004211,1.37e-08,15;UBERON:0009773,1.37e-08,15;UBERON:0001231,1.37e-08,15;UBERON:0001285,1.37e-08,15;UBERON:0007684,1.37e-08,15;UBERON:0004208,1.37e-08,15;UBERON:0001781,2.26e-08,4;UBERON:0006555,4.11e-08,16;UBERON:0004819,4.11e-08,16 | |||
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| ||
|short_description=p@chr14:68040603..68040607,+ | |short_description=p@chr14:68040603..68040607,+ | ||
}} | }} |
Latest revision as of 22:06, 24 July 2015
Short description: | p@chr14:68040603..68040607, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:68040603..68040607, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.12e-12 | 10 |
nephron tubule epithelial cell | 2.12e-12 | 10 |
light melanocyte | 7.42e-11 | 3 |
epithelial cell of nephron | 1.37e-08 | 15 |
kidney cell | 1.09e-07 | 17 |
kidney epithelial cell | 1.09e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 1.13e-56 | 2 |
neuron projection bundle | 1.13e-56 | 2 |
cranial nerve II | 2.37e-29 | 1 |
cranial nerve | 2.37e-29 | 1 |
nerve trunk | 2.37e-29 | 1 |
nerve connecting eye with brain | 2.37e-29 | 1 |
nerve | 2.37e-29 | 1 |
retinal neural layer | 2.37e-29 | 1 |
presumptive neural retina | 2.37e-29 | 1 |
corpus callosum | 3.16e-29 | 1 |
central nervous system cell part cluster | 3.16e-29 | 1 |
axon tract | 3.16e-29 | 1 |
intercerebral commissure | 3.16e-29 | 1 |
dorsal telencephalic commissure | 3.16e-29 | 1 |
brain white matter | 3.16e-29 | 1 |
brain commissure | 3.16e-29 | 1 |
white matter | 3.16e-29 | 1 |
nervous system commissure | 3.16e-29 | 1 |
cerebral hemisphere white matter | 3.16e-29 | 1 |
neural tissue | 2.05e-15 | 2 |
testis | 4.37e-15 | 8 |
nephron tubule epithelium | 2.12e-12 | 10 |
male reproductive organ | 2.98e-11 | 11 |
nephron epithelium | 1.37e-08 | 15 |
renal tubule | 1.37e-08 | 15 |
nephron tubule | 1.37e-08 | 15 |
nephron | 1.37e-08 | 15 |
uriniferous tubule | 1.37e-08 | 15 |
nephrogenic mesenchyme | 1.37e-08 | 15 |
layer of retina | 2.26e-08 | 4 |
excretory tube | 4.11e-08 | 16 |
kidney epithelium | 4.11e-08 | 16 |