FFCP PHASE1:Hg19::chr14:59830347..59830363,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:59830347..59830363,+ to FFCP PHASE1:Hg19::chr14:59830347..59830363,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:59830347..59830363,+ | |||
|coexpression_cluster_id=C2304 | |||
|description=CAGE_peak_at_chr14:59830347..59830363,+ | |||
|id=chr14:59830347..59830363,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.39e-21!254;CL:0000076!9.54e-16!62;CL:0000220!2.14e-11!246;CL:0002321!5.13e-11!248;CL:0002076!3.52e-10!43;CL:0002494!1.02e-07!16;CL:0000223!1.55e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.22e-10;42!CL:0002251;4.25e-10;20!CL:0000154;2.27e-08;6!CL:0002494;1.17e-07;16!CL:0000150;2.20e-07;9!CL:0002548;2.83e-07;6!CL:0000622;2.94e-07;5!CL:0000076;6.13e-07;63!CL:0000077;6.24e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.27e-19,253;CL:0000076,8.67e-14,63;CL:0002076,3.62e-13,42;CL:0000223,2.80e-10,58;CL:0002251,4.18e-10,20;CL:0000154,1.97e-08,6;CL:0002494,1.24e-07,16;CL:0000150,1.85e-07,9;CL:0000622,2.40e-07,5;CL:0002548,3.65e-07,6;CL:0000077,4.97e-07,19;CL:0002159,8.84e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.52e-10!14;DOID:305!4.44e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.26e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-16,14;DOID:305,9.67e-11,106;DOID:0050687,6.77e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001048!7.11e-12!168;UBERON:0000948!5.82e-09!24;UBERON:0005498!5.82e-09!24;UBERON:0004140!5.82e-09!24;UBERON:0009881!5.82e-09!24;UBERON:0004141!5.82e-09!24;UBERON:0003084!5.82e-09!24;UBERON:0007005!5.82e-09!24;UBERON:0004139!5.82e-09!24;UBERON:0004291!5.82e-09!24;UBERON:0007100!8.07e-09!27;UBERON:0004119!3.31e-08!169;UBERON:0000925!3.31e-08!169;UBERON:0006595!3.31e-08!169;UBERON:0004872!6.27e-08!84;UBERON:0001004!8.87e-08!72;UBERON:0003104!2.46e-07!238;UBERON:0009142!2.46e-07!238;UBERON:0000119!2.80e-07!312;UBERON:0000483!2.88e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.57e-07;5!UBERON:0000486;5.89e-07;12!UBERON:0000948;7.69e-07;22!UBERON:0003343;9.48e-07;4!UBERON:0004785;9.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.74e-09,160;UBERON:0000365,1.26e-07,5;UBERON:0004119,1.39e-07,160;UBERON:0000925,1.39e-07,160;UBERON:0006595,1.39e-07,160;UBERON:0001004,3.43e-07,74 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.986680828671798,2.00146596706261,0.446961094427288,2.61701557230111,0,1.26343974685366,0,0.491467873003018,0,0.873765488520689,0,0,0,2.01697543935533,0.602694528023977,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,4.59710612239464,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,4.98663991189768,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0.221729397462564,0.175669571386252,0.392937226493138,1.45718115317017,1.85392221392215,0,0,0,0,0,0,0.79504962946682,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0.66944122552934,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,2.18047026071267,0.496971951695318,1.51956613997496,0.794455084879313,0.286836620748814,0.709336764396714,5.04609840128076,1.06748995729705,3.45334567784024,3.42332138939743,1.34710672069688,1.47115712802113,0.302714855289863,0.576175924479999,0,0,1.1409436430889,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0.211931901159562,0,0.515262646192195,0,0,0,0,0,0.0920498986422993,3.55621325001386,0,0,0,7.73043412653187,4.63668405004419,9.17774705244812,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.842923450390509,0.723033089650446,1.10293972732394,0.217879444092406,3.55905928666645,1.48314438976181,2.15843611637881,2.30848294167834,0,0,0,0,0,0,3.54473944008842,0,0,0.514703430895577,0.98775256867763,8.99214026060957,27.243351523552,9.90696363196267,0,0,0,0,2.34817388471643,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,2.81201501960331,4.70349958956807,6.238104278665,9.49320340650192,15.40359874124,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,12.79789986002,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,2.37585561880029,2.1100756394171,3.48613383440118,0.699810938274399,0,0,0,0,0,1.42636905040718,1.01346914667305,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.831883446123229,1.07057393278297,0.630809660135739,0.468565659970853,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,2.23297027036899,0.306923946576125,0.280660094433074,0.256278298511402,2.04682899626681,0.160853921143607,1.48418066444991,0.308419387605311,1.77561725313127,0.164254312027618,1.55776328755086,0.232420756919918,0,6.01519410909855,1.65745780084613,0.114814448164607,0,0.262248829918848,0.902399225814824,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,1.44257416306811,0,0,2.29706215198469,7.15066270640173,3.21367859688319,0,0.770243085573222,0.614014698904518,0.413509717453592,0.214840489736547,0.435050081742686,0.0852266274161009,0.267096106940212,2.31398881505369,4.22818148203234,1.65896526242959,0.50578890427775,0,0,0,0,1.06461206063404,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.353437207037059,0.808729926293264,1.58510321173008,0.842516912477962,0.48763373908959,0,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0,0,0.405820753925408,0.92947049429925,1.12678241012897,0.286822704408103,0.785992328104969,0,0,0.633322905892992,0.658589785919804,0,0.349934720244983,6.54310366533482,2.01090682660736,0,0.847294206991012,2.58303223602738,5.05414427002877,2.66058092122005,10.1078296091062,0,0,0,0,0,0,0,0,0,0,9.80160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,2.86493381685228,2.37571744666111,8.6004996587785,0,0,9.461239926947,0,0,0.398495976502139,0.552567831062295,0,0,0,0,2.42644548097782,0.537063524026827,0,1.08507746200627,0,0,0,0,0,0,0,0,3.18621655199399,1.27126825146383,0,0,0.291604613383254,0,0,0,0,0,0,0.87754158861589,0,13.2452557064673,1.23120413606075,0.91153644677601,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0.216388639742091,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,12.7718352450966,2.93496928398135,0,0.789168805698781,0,0,0.063186579628488,0,0,1.32930774541437,0,0.313932918407225,0,0.284609546029793,0.138674673013139,1.90915712168644,11.0731409078247,15.2353611515704,0.873633341210151,0,2.6124209448053,5.48169878146392,3.03827191096874,1.06687918137261,0,1.35588444468319,6.57801238304404,0.397429223405979,0,10.1686719022098,0.801588202515337,0,0.39961921916426,0,0,0,3.16920555573929,0.124252535565433,0.707082103850386,0.135904206073614,0.104602846312333,0,0,0,0,0,2.57859264851974,0,1.95497680890578,0.229160424011684,0.717873024576814,0,0.429226048136571,0.89268582976749,0.806201669840715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,2.60058834087354,0.262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| ||
|short_description=p@chr14:59830347..59830363,+ | |||
}} | }} |
Latest revision as of 21:28, 24 July 2015
Short description: | p@chr14:59830347..59830363, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:59830347..59830363, + |
Coexpression cluster: | C2304_malignant_mesothelioma_Keratinocyte_Mesenchymal_oral_epidermoid_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.27e-19 | 253 |
squamous epithelial cell | 8.67e-14 | 63 |
endo-epithelial cell | 3.62e-13 | 42 |
endodermal cell | 2.80e-10 | 58 |
epithelial cell of alimentary canal | 4.18e-10 | 20 |
protein secreting cell | 1.97e-08 | 6 |
cardiocyte | 1.24e-07 | 16 |
glandular epithelial cell | 1.85e-07 | 9 |
acinar cell | 2.40e-07 | 5 |
cardiac fibroblast | 3.65e-07 | 6 |
mesothelial cell | 4.97e-07 | 19 |
general ecto-epithelial cell | 8.84e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
primordium | 1.74e-09 | 160 |
urothelium | 1.26e-07 | 5 |
endoderm-derived structure | 1.39e-07 | 160 |
endoderm | 1.39e-07 | 160 |
presumptive endoderm | 1.39e-07 | 160 |
respiratory system | 3.43e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-16 | 14 |
carcinoma | 9.67e-11 | 106 |
cell type cancer | 6.77e-07 | 143 |