FFCP PHASE1:Hg19::chr14:57271021..57271034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:57271021..57271034,- | |||
|coexpression_cluster_id=C535 | |coexpression_cluster_id=C535 | ||
|description=CAGE_peak_at_chr14:57271021..57271034,- | |description=CAGE_peak_at_chr14:57271021..57271034,- | ||
|id=chr14:57271021..57271034,- | |id=chr14:57271021..57271034,- | ||
|ontology_enrichment_celltype=CL:0002322!3.47e-29!5;CL:0000047!6.20e-12!8;CL:0000147!2.67e-10!14;CL:0002319!7.21e-10!25;CL:0000540!1.77e-09!6;CL:0000031!1.77e-09!6;CL:0000404!1.77e-09!6;CL:0002586!6.40e-09!3;CL:0000133!7.90e-08!59;CL:0000149!6.90e-07!4 | |ontology_enrichment_celltype=CL:0002322!3.47e-29!5;CL:0000047!6.20e-12!8;CL:0000147!2.67e-10!14;CL:0002319!7.21e-10!25;CL:0000540!1.77e-09!6;CL:0000031!1.77e-09!6;CL:0000404!1.77e-09!6;CL:0002586!6.40e-09!3;CL:0000133!7.90e-08!59;CL:0000149!6.90e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002586;7.02e-08;3!CL:0002319;2.68e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,8.29e-08,3;CL:0002319,2.54e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.72e-08;10!UBERON:0003056;5.18e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!1.10e-11!22;DOID:2994!1.10e-11!22 | |ontology_enrichment_disease=DOID:3095!1.10e-11!22;DOID:2994!1.10e-11!22 | ||
|ontology_enrichment_disease_v019=DOID:3093;1.13e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.13e-07,11 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000966;7.22e-17;5!UBERON:0005388;7.22e-17;5!UBERON:0001802;7.22e-17;5!UBERON:0001905;3.52e-11;2!UBERON:0002757;3.52e-11;2!UBERON:0010134;3.52e-11;2!UBERON:0005408;3.52e-11;2!UBERON:0001899;3.52e-11;2!UBERON:0000970;1.30e-09;20!UBERON:0002104;3.49e-09;21!UBERON:0000020;1.95e-08;23!UBERON:0001032;4.15e-08;24!UBERON:0004456;4.15e-08;24!UBERON:0001781;7.02e-08;3!UBERON:0001782;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,3.71e-14,6;UBERON:0005388,3.71e-14,6;UBERON:0001802,3.71e-14,6;UBERON:0001905,4.09e-11,2;UBERON:0002757,4.09e-11,2;UBERON:0010134,4.09e-11,2;UBERON:0005408,4.09e-11,2;UBERON:0001899,4.09e-11,2;UBERON:0000970,3.75e-09,21;UBERON:0002104,3.75e-09,21;UBERON:0000020,4.41e-08,24;UBERON:0001032,4.41e-08,24;UBERON:0004456,4.41e-08,24;UBERON:0001782,8.29e-08,3;UBERON:0005424,8.29e-08,3 | |||
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|short_description=p@chr14:57271021..57271034,- | |short_description=p@chr14:57271021..57271034,- | ||
}} | }} |
Latest revision as of 21:22, 24 July 2015
Short description: | p@chr14:57271021..57271034, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:57271021..57271034, - |
Coexpression cluster: | C535_medulloblastoma_small_pineal_retinoblastoma_eye_Retinal_retina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 8.29e-08 | 3 |
neural cell | 2.54e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
retina | 3.71e-14 | 6 |
photoreceptor array | 3.71e-14 | 6 |
posterior segment of eyeball | 3.71e-14 | 6 |
pineal body | 4.09e-11 | 2 |
regional part of epithalamus | 4.09e-11 | 2 |
secretory circumventricular organ | 4.09e-11 | 2 |
circumventricular organ | 4.09e-11 | 2 |
epithalamus | 4.09e-11 | 2 |
eye | 3.75e-09 | 21 |
visual system | 3.75e-09 | 21 |
sense organ | 4.41e-08 | 24 |
sensory system | 4.41e-08 | 24 |
entire sense organ system | 4.41e-08 | 24 |
pigmented layer of retina | 8.29e-08 | 3 |
presumptive retinal pigmented epithelium | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.13e-07 | 11 |