FFCP PHASE1:Hg19::chr14:57021818..57021822,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:57021818..57021822,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_at_chr14:57021818..57021822,+ | |description=CAGE_peak_at_chr14:57021818..57021822,+ | ||
|id=chr14:57021818..57021822,+ | |id=chr14:57021818..57021822,+ | ||
|ontology_enrichment_celltype=CL:0000064!1.29e-24!3;CL:0005012!1.29e-24!3;CL:0000067!1.29e-24!3;CL:0002304!1.29e-24!3;CL:0002586!2.19e-07!3 | |ontology_enrichment_celltype=CL:0000064!1.29e-24!3;CL:0005012!1.29e-24!3;CL:0000067!1.29e-24!3;CL:0002304!1.29e-24!3;CL:0002586!2.19e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000082;6.95e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000082,6.95e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.67e-08;29!UBERON:0001041;4.53e-08;30 | |||
|ontology_enrichment_disease=DOID:1909!2.07e-10!2;DOID:171!2.72e-08!10;DOID:3095!4.34e-08!22;DOID:2994!4.34e-08!22 | |ontology_enrichment_disease=DOID:1909!2.07e-10!2;DOID:171!2.72e-08!10;DOID:3095!4.34e-08!22;DOID:2994!4.34e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:5409;3.10e-50;4!DOID:1325;1.78e-29;7!DOID:3904;1.78e-29;7!DOID:3905;2.62e-23;9!DOID:1324;1.22e-14;15!DOID:0050615;8.02e-14;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.10e-50,4;DOID:1325,1.78e-29,7;DOID:3904,1.78e-29,7;DOID:3905,2.62e-23,9;DOID:1324,1.22e-14,15;DOID:0050615,8.02e-14,16 | |||
|ontology_enrichment_uberon=UBERON:0001778!1.29e-24!3;UBERON:0001775!1.29e-24!3;UBERON:0002336!5.62e-19!1;UBERON:0001018!5.62e-19!1;UBERON:0002473!5.62e-19!1;UBERON:0005340!5.62e-19!1;UBERON:0002316!5.62e-19!1;UBERON:0003544!5.62e-19!1;UBERON:0001020!5.62e-19!1;UBERON:0005970!5.62e-19!1;UBERON:0002437!5.62e-19!1;UBERON:0000488!9.72e-19!4;UBERON:0000019!1.88e-15!19;UBERON:0000047!1.88e-15!19;UBERON:0004088!1.88e-15!19;UBERON:0003072!1.88e-15!19;UBERON:0003071!1.88e-15!19;UBERON:0004128!1.88e-15!19;UBERON:0000966!1.88e-15!5;UBERON:0005388!1.88e-15!5;UBERON:0001802!1.88e-15!5;UBERON:0007625!2.61e-15!11;UBERON:0000970!1.06e-14!20;UBERON:0002104!5.10e-14!21;UBERON:0001456!5.10e-14!21;UBERON:0002203!7.78e-13!6;UBERON:0001768!7.78e-13!6;UBERON:0000020!7.83e-13!23;UBERON:0001032!2.59e-12!24;UBERON:0004456!2.59e-12!24;UBERON:0005085!3.01e-10!29;UBERON:0005162!3.58e-10!2;UBERON:0000122!3.58e-10!2;UBERON:0002200!2.03e-07!11;UBERON:0006876!2.03e-07!11;UBERON:0001781!2.19e-07!3;UBERON:0001782!2.19e-07!3;UBERON:0005424!2.19e-07!3;UBERON:0003056!2.75e-07!61;UBERON:0002346!5.98e-07!90 | |ontology_enrichment_uberon=UBERON:0001778!1.29e-24!3;UBERON:0001775!1.29e-24!3;UBERON:0002336!5.62e-19!1;UBERON:0001018!5.62e-19!1;UBERON:0002473!5.62e-19!1;UBERON:0005340!5.62e-19!1;UBERON:0002316!5.62e-19!1;UBERON:0003544!5.62e-19!1;UBERON:0001020!5.62e-19!1;UBERON:0005970!5.62e-19!1;UBERON:0002437!5.62e-19!1;UBERON:0000488!9.72e-19!4;UBERON:0000019!1.88e-15!19;UBERON:0000047!1.88e-15!19;UBERON:0004088!1.88e-15!19;UBERON:0003072!1.88e-15!19;UBERON:0003071!1.88e-15!19;UBERON:0004128!1.88e-15!19;UBERON:0000966!1.88e-15!5;UBERON:0005388!1.88e-15!5;UBERON:0001802!1.88e-15!5;UBERON:0007625!2.61e-15!11;UBERON:0000970!1.06e-14!20;UBERON:0002104!5.10e-14!21;UBERON:0001456!5.10e-14!21;UBERON:0002203!7.78e-13!6;UBERON:0001768!7.78e-13!6;UBERON:0000020!7.83e-13!23;UBERON:0001032!2.59e-12!24;UBERON:0004456!2.59e-12!24;UBERON:0005085!3.01e-10!29;UBERON:0005162!3.58e-10!2;UBERON:0000122!3.58e-10!2;UBERON:0002200!2.03e-07!11;UBERON:0006876!2.03e-07!11;UBERON:0001781!2.19e-07!3;UBERON:0001782!2.19e-07!3;UBERON:0005424!2.19e-07!3;UBERON:0003056!2.75e-07!61;UBERON:0002346!5.98e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0004802;6.95e-12;19!UBERON:0000115;6.95e-12;19!UBERON:0002048;1.80e-10;22!UBERON:0004807;1.80e-10;22!UBERON:0000117;1.80e-10;22!UBERON:0000171;1.80e-10;22!UBERON:0000170;1.80e-10;22!UBERON:0005178;2.32e-07;34!UBERON:0005181;2.32e-07;35!UBERON:0002224;2.32e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,6.95e-12,19;UBERON:0000115,6.95e-12,19;UBERON:0002048,1.80e-10,22;UBERON:0000117,1.80e-10,22;UBERON:0000171,1.80e-10,22;UBERON:0000170,1.80e-10,22;UBERON:0005597,1.80e-10,22;UBERON:0000118,1.80e-10,22;UBERON:0004807,1.52e-08,28;UBERON:0005178,2.74e-07,34;UBERON:0002224,2.74e-07,34;UBERON:0005181,4.03e-07,35;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p@chr14:57021818..57021822,+ | |short_description=p@chr14:57021818..57021822,+ | ||
}} | }} |
Latest revision as of 21:21, 24 July 2015
Short description: | p@chr14:57021818..57021822, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:57021818..57021822, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of lung | 6.95e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 6.95e-12 | 19 |
lung epithelium | 6.95e-12 | 19 |
lung | 1.80e-10 | 22 |
respiratory tube | 1.80e-10 | 22 |
respiration organ | 1.80e-10 | 22 |
pair of lungs | 1.80e-10 | 22 |
lung primordium | 1.80e-10 | 22 |
lung bud | 1.80e-10 | 22 |
respiratory system epithelium | 1.52e-08 | 28 |
thoracic cavity element | 2.74e-07 | 34 |
thoracic cavity | 2.74e-07 | 34 |
thoracic segment organ | 4.03e-07 | 35 |
epithelial bud | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.10e-50 | 4 |
bronchus cancer | 1.78e-29 | 7 |
bronchogenic carcinoma | 1.78e-29 | 7 |
lung carcinoma | 2.62e-23 | 9 |
lung cancer | 1.22e-14 | 15 |
respiratory system cancer | 8.02e-14 | 16 |