FFCP PHASE1:Hg19::chr14:55770665..55770674,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:55770665..55770674,-
|short_description=p@chr14:55770665..55770674,-
|description=CAGE_peak_at_chr14:55770665..55770674,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:55770665..55770674,- | |||
|coexpression_cluster_id=C1322 | |||
|description=CAGE_peak_at_chr14:55770665..55770674,- | |||
|id=chr14:55770665..55770674,- | |||
|ontology_enrichment_celltype=CL:0002057!1.94e-89!42;CL:0000860!5.43e-83!45;CL:0000766!4.12e-60!76;CL:0002194!3.46e-56!63;CL:0000576!3.46e-56!63;CL:0000040!3.46e-56!63;CL:0000559!3.46e-56!63;CL:0002009!2.90e-54!65;CL:0000557!8.52e-53!71;CL:0000839!6.29e-50!70;CL:0000738!9.37e-50!140;CL:0002087!8.20e-48!119;CL:0000037!3.90e-41!172;CL:0000566!3.90e-41!172;CL:0000763!4.67e-41!112;CL:0000049!4.67e-41!112;CL:0002031!1.87e-40!124;CL:0002032!8.36e-39!165;CL:0000837!8.36e-39!165;CL:0000988!2.13e-38!182;CL:0002393!9.57e-22!9;CL:0002397!9.57e-22!9;CL:0000134!4.19e-16!358;CL:0002320!1.28e-15!365;CL:0000767!1.49e-14!3;CL:0000219!6.62e-14!390;CL:0000623!1.93e-13!3;CL:0000825!1.93e-13!3;CL:0000034!4.52e-12!444;CL:0000048!7.45e-12!430;CL:0000723!1.46e-11!436;CL:0000094!1.86e-09!8;CL:0000081!7.20e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000767;8.68e-55;3!CL:0000094;1.19e-36;8!CL:0000081;8.36e-27;11!CL:0002032;3.25e-19;1!CL:0000557;3.25e-19;1!CL:0000766;1.56e-14;69!CL:0000860;1.60e-13;33!CL:0002057;1.60e-13;33!CL:0000473;1.36e-11;39!CL:0000234;1.36e-11;39!CL:0000771;1.50e-10;2!CL:0000576;7.48e-10;48!CL:0000763;1.47e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,8.69e-55,3;CL:0000094,1.14e-36,8;CL:0000081,8.10e-27,11;CL:0000766,4.34e-24,72;CL:0000763,2.30e-19,108;CL:0000049,2.30e-19,108;CL:0000860,2.83e-15,42;CL:0002057,2.83e-15,42;CL:0000473,2.36e-13,48;CL:0000234,2.36e-13,48;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000557,1.29e-12,67;CL:0000738,1.46e-12,136;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002194,1.17e-10,59;CL:0000576,1.17e-10,59;CL:0000040,1.17e-10,59;CL:0000559,1.17e-10,59;CL:0000771,1.43e-10,2;CL:0002009,2.62e-10,61;CL:0000839,1.58e-09,66 | |||
|ontology_enrichment_development_v019=CL:0002057;5.25e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.25e-46!80;UBERON:0001474!2.11e-42!86;UBERON:0002390!8.57e-40!102;UBERON:0003061!8.57e-40!102;UBERON:0002193!1.40e-35!112;UBERON:0004765!4.58e-35!101;UBERON:0001434!4.58e-35!101;UBERON:0002405!6.24e-30!115;UBERON:0002204!2.30e-18!167;UBERON:0003081!3.93e-17!216;UBERON:0002384!5.89e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.19e-11,76;UBERON:0001474,2.82e-10,82;UBERON:0004765,2.43e-09,90;UBERON:0002405,4.95e-09,93;UBERON:0002390,1.48e-08,98;UBERON:0003061,1.48e-08,98;UBERON:0001434,2.23e-08,100;UBERON:0002193,9.83e-08,108 | |||
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|short_description=p@chr14:55770665..55770674,- | |||
}} | }} |
Latest revision as of 21:19, 24 July 2015
Short description: | p@chr14:55770665..55770674, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:55770665..55770674, - |
Coexpression cluster: | C1322_Eosinophils_Basophils_CD14_Mast_Neutrophils_CD34_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 8.69e-55 | 3 |
granulocyte | 1.14e-36 | 8 |
blood cell | 8.10e-27 | 11 |
myeloid leukocyte | 4.34e-24 | 72 |
myeloid cell | 2.30e-19 | 108 |
common myeloid progenitor | 2.30e-19 | 108 |
classical monocyte | 2.83e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-15 | 42 |
defensive cell | 2.36e-13 | 48 |
phagocyte | 2.36e-13 | 48 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
granulocyte monocyte progenitor cell | 1.29e-12 | 67 |
leukocyte | 1.46e-12 | 136 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
monopoietic cell | 1.17e-10 | 59 |
monocyte | 1.17e-10 | 59 |
monoblast | 1.17e-10 | 59 |
promonocyte | 1.17e-10 | 59 |
eosinophil | 1.43e-10 | 2 |
macrophage dendritic cell progenitor | 2.62e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.58e-09 | 66 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.19e-11 | 76 |
bone element | 2.82e-10 | 82 |
skeletal element | 2.43e-09 | 90 |
immune system | 4.95e-09 | 93 |
hematopoietic system | 1.48e-08 | 98 |
blood island | 1.48e-08 | 98 |
skeletal system | 2.23e-08 | 100 |
hemolymphoid system | 9.83e-08 | 108 |