FFCP PHASE1:Hg19::chr14:55609369..55609392,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:55609369..55609392,+ | |||
|coexpression_cluster_id=C1200 | |||
|description=CAGE_peak_at_chr14:55609369..55609392,+ | |||
|id=chr14:55609369..55609392,+ | |||
|ontology_enrichment_celltype=CL:0000839!2.09e-28!70;CL:0002194!1.38e-26!63;CL:0000576!1.38e-26!63;CL:0000040!1.38e-26!63;CL:0000559!1.38e-26!63;CL:0000557!1.25e-25!71;CL:0002009!5.53e-25!65;CL:0000860!1.88e-23!45;CL:0002057!1.89e-23!42;CL:0000766!3.57e-23!76;CL:0000763!7.60e-11!112;CL:0000049!7.60e-11!112;CL:0002031!1.69e-09!124;CL:0002087!5.06e-08!119;CL:0000738!2.58e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.48e-60;33!CL:0002057;6.48e-60;33!CL:0000473;8.18e-56;39!CL:0000234;8.18e-56;39!CL:0000576;7.38e-30;48!CL:0000766;2.19e-22;69!CL:0000235;4.34e-12;6!CL:0000763;1.37e-10;100!CL:0002567;1.76e-09;3!CL:0002087;8.19e-08;104!CL:0000148;7.76e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.60e-63,48;CL:0000234,1.60e-63,48;CL:0002194,3.27e-58,59;CL:0000576,3.27e-58,59;CL:0000040,3.27e-58,59;CL:0000559,3.27e-58,59;CL:0002009,5.42e-56,61;CL:0000839,7.70e-54,66;CL:0000557,6.86e-53,67;CL:0000860,1.23e-52,42;CL:0002057,1.23e-52,42;CL:0000766,1.56e-48,72;CL:0000763,5.27e-29,108;CL:0000049,5.27e-29,108;CL:0002087,1.07e-26,115;CL:0002031,1.16e-26,120;CL:0000738,2.56e-22,136;CL:0002032,2.80e-17,161;CL:0000837,2.80e-17,161;CL:0000037,3.84e-16,168;CL:0000988,8.14e-15,177;CL:0000235,3.01e-12,6;CL:0002567,1.35e-09,3;CL:0000219,1.41e-08,386;CL:0000134,2.03e-07,354;CL:0002320,4.61e-07,361;CL:0000148,5.73e-07,10;CL:0000541,5.73e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-39;42!CL:0000049;2.81e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.11e-25!80;UBERON:0001474!2.20e-24!86;UBERON:0004765!3.82e-21!101;UBERON:0001434!3.82e-21!101;UBERON:0002193!4.96e-19!112;UBERON:0002390!5.31e-19!102;UBERON:0003061!5.31e-19!102;UBERON:0002405!1.30e-15!115;UBERON:0002204!1.72e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.36e-48,76;UBERON:0001474,4.11e-46,82;UBERON:0004765,4.39e-41,90;UBERON:0001434,5.70e-38,100;UBERON:0002405,2.38e-37,93;UBERON:0002390,6.42e-35,98;UBERON:0003061,6.42e-35,98;UBERON:0002193,9.92e-31,108;UBERON:0002204,1.41e-19,167;UBERON:0003081,3.66e-16,203;UBERON:0000926,2.09e-08,315;UBERON:0004120,2.09e-08,315;UBERON:0006603,2.09e-08,315;UBERON:0002384,4.39e-07,371 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.140954404095971,0,0,0,0,0,0.783556884599516,0.245733936501509,0,0.436882744260345,1.05506791291381,0.37129905888014,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,1.10799081706375,0.401088894940283,0.217010870715852,0.223915474239924,1.6194683300949,0.257575567634187,2.4717700592526,4.1566353805769,4.12392904019288,4.18372266430232,6.57868620834921,6.19412741790207,2.01384674625505,3.33008918487831,2.83778675866302,1.37898272294647,1.29096936716765,1.35426486594342,4.51781614902251,4.36649840092553,6.96642801779762,4.28517449319264,4.17207735198922,7.03270838378945,0.989553900560148,3.59034583718937,0.852449501065388,1.7412554317715,5.6738522469114,5.60540024096017,1.50749199154046,3.65038042894141,3.04064382587163,2.42159801053347,3.68277635987565,10.1267963981083,0.633765858935825,0,0,0.112328631146495,0.450530678524519,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.384273959177026,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0,0,0.364295288292542,0,1.29818957461873,0.522389211897802,1.06366368415092,0.238490624305342,0,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0.732186172644509,0,0,0,0,0.225222960966644,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0.747243402759005,0.23486899728753,0.323745888736263,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.515262646192195,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0.171567810298526,0.329250856225877,0,0.301586917234893,0.0925884451585296,0.651616610620649,0,0,0,0,0.144366447761074,0.925971025153221,0,2.37061319387782,1.71697232418975,1.47730203652438,1.40402559083543,0.743155811443641,0,0.16798212819886,0.141775097242386,0.268675568108545,0,0,0,0.44024217006613,0.829312462163088,0.576479813667846,1.00993946741104,0.444485260045183,1.52795370223311,2.34434894420094,11.9750712215894,1.23392991243988,1.8020583470635,0.571652865261156,0,0,0,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,3.64871341923571,3.51579964002488,16.8667151586425,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,2.55175500661265,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,1.24900292158013,0.473107245101804,0.468565659970853,0,2.27407504055985,0,0,0.184369168541703,0.434418072340414,0,0,0,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0.532685175939381,0.328508624055237,0,0.581051892299796,0.483437798366489,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0.193341436584244,0.462145851343933,0.307007349452259,0.413509717453592,0,0.145016693914229,0.170453254832202,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.424216295861138,0,1.10273068709225,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.633322905892992,1.31717957183961,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,1.19372242368845,0,1.84296421259539,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0.20453736500431,0,0.311039587661807,0,0.358042349351218,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0.762760950878299,0.472775363535873,0,0,0,0,0,0,0,0.295547618953547,0,0.10893846351899,0,0.230850775511391,0,0.46112780877612,0.0897576444097721,0.108647371922008,0.638002319463839,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.353830258013357,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0.728341138602278,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,1.21491816834592,0.0979923974143777,0,0.17472666824203,0.171986032471617,0.19351266257817,0.146178634172371,0.164230914106418,0.0969890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| |||
|short_description=p@chr14:55609369..55609392,+ | |||
}} |
Latest revision as of 21:18, 24 July 2015
Short description: | p@chr14:55609369..55609392, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:55609369..55609392, + |
Coexpression cluster: | C1200_Monocytederived_Melanocyte_CD14_large_amniotic_Mast_melanoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.60e-63 | 48 |
phagocyte | 1.60e-63 | 48 |
monopoietic cell | 3.27e-58 | 59 |
monocyte | 3.27e-58 | 59 |
monoblast | 3.27e-58 | 59 |
promonocyte | 3.27e-58 | 59 |
macrophage dendritic cell progenitor | 5.42e-56 | 61 |
myeloid lineage restricted progenitor cell | 7.70e-54 | 66 |
granulocyte monocyte progenitor cell | 6.86e-53 | 67 |
classical monocyte | 1.23e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-52 | 42 |
myeloid leukocyte | 1.56e-48 | 72 |
myeloid cell | 5.27e-29 | 108 |
common myeloid progenitor | 5.27e-29 | 108 |
nongranular leukocyte | 1.07e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-26 | 120 |
leukocyte | 2.56e-22 | 136 |
hematopoietic oligopotent progenitor cell | 2.80e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-17 | 161 |
hematopoietic stem cell | 3.84e-16 | 168 |
hematopoietic cell | 8.14e-15 | 177 |
macrophage | 3.01e-12 | 6 |
light melanocyte | 1.35e-09 | 3 |
motile cell | 1.41e-08 | 386 |
mesenchymal cell | 2.03e-07 | 354 |
connective tissue cell | 4.61e-07 | 361 |
melanocyte | 5.73e-07 | 10 |
melanoblast | 5.73e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.36e-48 | 76 |
bone element | 4.11e-46 | 82 |
skeletal element | 4.39e-41 | 90 |
skeletal system | 5.70e-38 | 100 |
immune system | 2.38e-37 | 93 |
hematopoietic system | 6.42e-35 | 98 |
blood island | 6.42e-35 | 98 |
hemolymphoid system | 9.92e-31 | 108 |
musculoskeletal system | 1.41e-19 | 167 |
lateral plate mesoderm | 3.66e-16 | 203 |
mesoderm | 2.09e-08 | 315 |
mesoderm-derived structure | 2.09e-08 | 315 |
presumptive mesoderm | 2.09e-08 | 315 |
connective tissue | 4.39e-07 | 371 |