FFCP PHASE1:Hg19::chr14:38679569..38679581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:38679569..38679581,+ | |||
|coexpression_cluster_id=C3232 | |coexpression_cluster_id=C3232 | ||
|description=CAGE_peak_at_chr14:38679569..38679581,+ | |description=CAGE_peak_at_chr14:38679569..38679581,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!1.78e-28!23;CL:0000057!4.10e-15!75;CL:0000055!1.89e-12!180;CL:0002622!2.00e-09!3;CL:0002594!4.56e-08!4;CL:1000487!6.39e-07!2;CL:0000192!9.80e-07!42;CL:0000514!9.80e-07!42 | |ontology_enrichment_celltype=CL:0002620!1.78e-28!23;CL:0000057!4.10e-15!75;CL:0000055!1.89e-12!180;CL:0002622!2.00e-09!3;CL:0002594!4.56e-08!4;CL:1000487!6.39e-07!2;CL:0000192!9.80e-07!42;CL:0000514!9.80e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.45e-28;23!CL:0002594;1.06e-18;4 | |ontology_enrichment_celltype_v019=CL:0002620;3.45e-28;23!CL:0002594;1.06e-18;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.37e-28,23;CL:0002594,1.16e-18,4;CL:0000057,2.03e-11,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!1.39e-16!5;DOID:450!1.39e-16!5;DOID:66!1.39e-16!5;DOID:423!1.39e-16!5;DOID:0080000!1.39e-16!5;DOID:11722!1.39e-16!5;DOID:0060084!1.08e-10!3;DOID:127!1.08e-10!3;DOID:0060072!4.15e-08!4 | |ontology_enrichment_disease=DOID:17!1.39e-16!5;DOID:450!1.39e-16!5;DOID:66!1.39e-16!5;DOID:423!1.39e-16!5;DOID:0080000!1.39e-16!5;DOID:11722!1.39e-16!5;DOID:0060084!1.08e-10!3;DOID:127!1.08e-10!3;DOID:0060072!4.15e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:17;1.68e-15;5!DOID:450;1.68e-15;5!DOID:66;1.68e-15;5!DOID:423;1.68e-15;5!DOID:0080000;1.68e-15;5!DOID:11722;1.68e-15;5!DOID:0060084;2.55e-07;3!DOID:127;2.55e-07;3 | |ontology_enrichment_disease_v019=DOID:17;1.68e-15;5!DOID:450;1.68e-15;5!DOID:66;1.68e-15;5!DOID:423;1.68e-15;5!DOID:0080000;1.68e-15;5!DOID:11722;1.68e-15;5!DOID:0060084;2.55e-07;3!DOID:127;2.55e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:17,2.02e-15,5;DOID:450,2.02e-15,5;DOID:66,2.02e-15,5;DOID:423,2.02e-15,5;DOID:0080000,2.02e-15,5;DOID:11722,2.02e-15,5;DOID:0060084,2.63e-07,3;DOID:127,2.63e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002097!9.93e-15!40;UBERON:0002199!1.12e-12!45;UBERON:0002416!1.12e-12!45;UBERON:0003102!2.55e-08!95;UBERON:0001310!4.56e-08!4 | |ontology_enrichment_uberon=UBERON:0002097!9.93e-15!40;UBERON:0002199!1.12e-12!45;UBERON:0002416!1.12e-12!45;UBERON:0003102!2.55e-08!95;UBERON:0001310!4.56e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.06e-18;4!UBERON:0002097;2.93e-12;41!UBERON:0002199;1.27e-10;46!UBERON:0002416;1.27e-10;46!UBERON:0010260;7.45e-09;9!UBERON:0003102;3.09e-08;50 | |ontology_enrichment_uberon_v019=UBERON:0001310;1.06e-18;4!UBERON:0002097;2.93e-12;41!UBERON:0002199;1.27e-10;46!UBERON:0002416;1.27e-10;46!UBERON:0010260;7.45e-09;9!UBERON:0003102;3.09e-08;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,1.16e-18,4;UBERON:0002097,8.27e-16,41;UBERON:0002199,4.42e-14,46;UBERON:0002416,4.42e-14,46;UBERON:0010260,7.75e-09,9;UBERON:0001637,3.71e-07,42;UBERON:0003509,3.71e-07,42;UBERON:0004572,3.71e-07,42 | |||
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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69359477496841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15267562826634,0.427114777637135,0.423863802319124,3.00091096084402,0.412210116953756,3.09168648054755,0.744467425326359,2.70042131586026,0.584622030967192,2.27190396819703,0.0920498986422993,0,3.90510551768276,0.503760491138201,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0.464845549297286,1.25924938732256,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,1.21746226177622,0.30982349809975,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17199840701485,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0.761610424337591,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.537266523244462,0,0.219284049578707,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:38679569..38679581,+ | |short_description=p@chr14:38679569..38679581,+ | ||
}} | }} |
Latest revision as of 20:36, 24 July 2015
Short description: | p@chr14:38679569..38679581, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:38679569..38679581, + |
Coexpression cluster: | C3232_Fibroblast_Smooth_leiomyoma_mesenchymal_nonsmall_Myoblast_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.37e-28 | 23 |
smooth muscle cell of the umbilical artery | 1.16e-18 | 4 |
fibroblast | 2.03e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 1.16e-18 | 4 |
skin of body | 8.27e-16 | 41 |
integument | 4.42e-14 | 46 |
integumental system | 4.42e-14 | 46 |
umbilical blood vessel | 7.75e-09 | 9 |
artery | 3.71e-07 | 42 |
arterial blood vessel | 3.71e-07 | 42 |
arterial system | 3.71e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.02e-15 | 5 |
myotonic disease | 2.02e-15 | 5 |
muscle tissue disease | 2.02e-15 | 5 |
myopathy | 2.02e-15 | 5 |
muscular disease | 2.02e-15 | 5 |
myotonic dystrophy | 2.02e-15 | 5 |
cell type benign neoplasm | 2.63e-07 | 3 |
leiomyoma | 2.63e-07 | 3 |