FFCP PHASE1:Hg19::chr14:37669891..37669895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:37669891..37669895,+ | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_at_chr14:37669891..37669895,+ | |description=CAGE_peak_at_chr14:37669891..37669895,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.86e-18;2 | |ontology_enrichment_celltype_v019=CL:0000047;9.86e-18;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3 | |ontology_enrichment_development_v019=UBERON:0005425;5.97e-34;1!UBERON:0003056;2.74e-12;3 | ||
|ontology_enrichment_disease=DOID:0050687!2.62e-12!143;DOID:1749!4.07e-11!14;DOID:305!4.66e-11!106;DOID:14566!5.60e-07!239 | |ontology_enrichment_disease=DOID:0050687!2.62e-12!143;DOID:1749!4.07e-11!14;DOID:305!4.66e-11!106;DOID:14566!5.60e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3307;9.86e-18;2 | |ontology_enrichment_disease_v019=DOID:3307;9.86e-18;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3307,7.67e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.65e-08!94;UBERON:0001016!3.65e-08!94;UBERON:0001049!1.60e-07!57;UBERON:0005068!1.60e-07!57;UBERON:0006241!1.60e-07!57;UBERON:0007135!1.60e-07!57;UBERON:0001017!1.89e-07!82;UBERON:0003080!2.56e-07!42;UBERON:0000955!3.58e-07!69;UBERON:0006238!3.58e-07!69;UBERON:0002616!4.69e-07!59;UBERON:0000924!9.12e-07!173;UBERON:0006601!9.12e-07!173;UBERON:0005743!9.65e-07!86 | |ontology_enrichment_uberon=UBERON:0000073!3.65e-08!94;UBERON:0001016!3.65e-08!94;UBERON:0001049!1.60e-07!57;UBERON:0005068!1.60e-07!57;UBERON:0006241!1.60e-07!57;UBERON:0007135!1.60e-07!57;UBERON:0001017!1.89e-07!82;UBERON:0003080!2.56e-07!42;UBERON:0000955!3.58e-07!69;UBERON:0006238!3.58e-07!69;UBERON:0002616!4.69e-07!59;UBERON:0000924!9.12e-07!173;UBERON:0006601!9.12e-07!173;UBERON:0005743!9.65e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0001872;6.78e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000941;5.97e-34;1!UBERON:0001785;5.97e-34;1!UBERON:0002464;5.97e-34;1!UBERON:0004904;5.97e-34;1!UBERON:0001021;5.97e-34;1!UBERON:0003714;9.86e-18;2!UBERON:0005162;9.86e-18;2!UBERON:0000122;9.86e-18;2!UBERON:0001872;6.78e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.05e-34,1;UBERON:0001785,5.05e-34,1;UBERON:0002464,5.05e-34,1;UBERON:0004904,5.05e-34,1;UBERON:0001021,5.05e-34,1;UBERON:0003902,5.05e-34,1;UBERON:0005425,5.05e-34,1;UBERON:0003714,9.07e-18,2;UBERON:0005162,9.07e-18,2;UBERON:0000122,9.07e-18,2;UBERON:0001781,1.44e-09,4;UBERON:0001872,7.49e-08,5;UBERON:0000966,8.48e-07,6;UBERON:0005388,8.48e-07,6;UBERON:0001802,8.48e-07,6 | |||
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| ||
|short_description=p@chr14:37669891..37669895,+ | |short_description=p@chr14:37669891..37669895,+ | ||
}} | }} |
Latest revision as of 20:34, 24 July 2015
Short description: | p@chr14:37669891..37669895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:37669891..37669895, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.05e-34 | 1 |
cranial nerve | 5.05e-34 | 1 |
nerve trunk | 5.05e-34 | 1 |
nerve connecting eye with brain | 5.05e-34 | 1 |
nerve | 5.05e-34 | 1 |
retinal neural layer | 5.05e-34 | 1 |
presumptive neural retina | 5.05e-34 | 1 |
neural tissue | 9.07e-18 | 2 |
multi cell component structure | 9.07e-18 | 2 |
neuron projection bundle | 9.07e-18 | 2 |
layer of retina | 1.44e-09 | 4 |
parietal lobe | 7.49e-08 | 5 |
retina | 8.48e-07 | 6 |
photoreceptor array | 8.48e-07 | 6 |
posterior segment of eyeball | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.67e-18 | 2 |