FFCP PHASE1:Hg19::chr14:29047309..29047323,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:29047309..29047323,+
|short_description=p@chr14:29047309..29047323,+
|description=CAGE_peak_at_chr14:29047309..29047323,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:29047309..29047323,+ | |||
|coexpression_cluster_id=C221 | |||
|description=CAGE_peak_at_chr14:29047309..29047323,+ | |||
|id=chr14:29047309..29047323,+ | |||
|ontology_enrichment_celltype=CL:0002494!1.64e-08!16;CL:0000055!6.00e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002603;1.21e-09;3!CL:0002494;4.76e-09;16!CL:1000306;2.48e-07;4!CL:0002547;2.48e-07;4!CL:0002549;6.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,9.10e-10,3;CL:0002494,4.01e-09,16;CL:1000306,2.24e-07,4;CL:0002547,2.24e-07,4;CL:0002549,4.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.70e-09!106;DOID:0050687!1.46e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3908;8.70e-11;5!DOID:3910;1.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,9.51e-11,5;DOID:3910,1.09e-07,2;DOID:0050687,1.48e-07,143;DOID:305,4.50e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.55e-07!347;UBERON:0000119!1.75e-07!312;UBERON:0001048!1.75e-07!168;UBERON:0000483!7.28e-07!309;UBERON:0002200!9.17e-07!11;UBERON:0006876!9.17e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.04e-07;2!UBERON:0002173;1.04e-07;2!UBERON:0002186;1.04e-07;2!UBERON:0004797;2.48e-07;4!UBERON:0000415;2.48e-07;4!UBERON:0007240;2.48e-07;4!UBERON:0005742;2.48e-07;4!UBERON:0005734;2.48e-07;4!UBERON:0004664;2.48e-07;4!UBERON:0004663;2.48e-07;4!UBERON:0005629;6.00e-07;2!UBERON:0005358;6.00e-07;2!UBERON:0001886;6.00e-07;2!UBERON:0004086;6.00e-07;2!UBERON:0005282;6.00e-07;2!UBERON:0005281;6.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.91e-08,160;UBERON:0004903,1.09e-07,2;UBERON:0002173,1.09e-07,2;UBERON:0002186,1.09e-07,2;UBERON:0000948,1.99e-07,24;UBERON:0005498,1.99e-07,24;UBERON:0004140,1.99e-07,24;UBERON:0009881,1.99e-07,24;UBERON:0004141,1.99e-07,24;UBERON:0003084,1.99e-07,24;UBERON:0007005,1.99e-07,24;UBERON:0004139,1.99e-07,24;UBERON:0004291,1.99e-07,24;UBERON:0000415,2.24e-07,4;UBERON:0007240,2.24e-07,4;UBERON:0005742,2.24e-07,4;UBERON:0005734,2.24e-07,4;UBERON:0004664,2.24e-07,4;UBERON:0004663,2.24e-07,4;UBERON:0005629,4.42e-07,2;UBERON:0005358,4.42e-07,2;UBERON:0001886,4.42e-07,2;UBERON:0004086,4.42e-07,2;UBERON:0005282,4.42e-07,2;UBERON:0005281,4.42e-07,2 | |||
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| ||
|short_description=p@chr14:29047309..29047323,+ | |||
}} | }} |
Latest revision as of 20:02, 24 July 2015
Short description: | p@chr14:29047309..29047323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:29047309..29047323, + |
Coexpression cluster: | C221_alveolar_Osteoblast_Myoblast_mesenchymal_liposarcoma_Smooth_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 9.10e-10 | 3 |
cardiocyte | 4.01e-09 | 16 |
fibroblast of tunica adventitia of artery | 2.24e-07 | 4 |
fibroblast of the aortic adventitia | 2.24e-07 | 4 |
fibroblast of choroid plexus | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
primordium | 2.91e-08 | 160 |
bronchoalveolar duct junction | 1.09e-07 | 2 |
alveolar duct | 1.09e-07 | 2 |
bronchiole | 1.09e-07 | 2 |
heart | 1.99e-07 | 24 |
primitive heart tube | 1.99e-07 | 24 |
primary heart field | 1.99e-07 | 24 |
anterior lateral plate mesoderm | 1.99e-07 | 24 |
heart tube | 1.99e-07 | 24 |
heart primordium | 1.99e-07 | 24 |
cardiac mesoderm | 1.99e-07 | 24 |
cardiogenic plate | 1.99e-07 | 24 |
heart rudiment | 1.99e-07 | 24 |
artery wall | 2.24e-07 | 4 |
tunica adventitia of artery | 2.24e-07 | 4 |
adventitia | 2.24e-07 | 4 |
tunica adventitia of blood vessel | 2.24e-07 | 4 |
aorta tunica adventitia | 2.24e-07 | 4 |
aorta wall | 2.24e-07 | 4 |
vascular plexus | 4.42e-07 | 2 |
ventricle of nervous system | 4.42e-07 | 2 |
choroid plexus | 4.42e-07 | 2 |
brain ventricle | 4.42e-07 | 2 |
ventricular system of brain | 4.42e-07 | 2 |
ventricular system of central nervous system | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 9.51e-11 | 5 |
lung adenocarcinoma | 1.09e-07 | 2 |
cell type cancer | 1.48e-07 | 143 |
carcinoma | 4.50e-07 | 106 |