FFCP PHASE1:Hg19::chr14:28314513..28314526,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000555797_5end | |association_with_transcript=-21bp_to_ENST00000555797_5end | ||
|cluster_id=chr14:28314513..28314526,- | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_1_at_ENST00000555797_5end | |description=CAGE_peak_1_at_ENST00000555797_5end | ||
|id=chr14:28314513..28314526,- | |id=chr14:28314513..28314526,- | ||
|ontology_enrichment_celltype=CL:0000054!1.88e-16!2;CL:0000137!1.88e-16!2;CL:0000092!1.88e-16!2;CL:0000062!9.50e-12!11;CL:0000375!9.50e-12!11;CL:0000335!9.50e-12!11 | |ontology_enrichment_celltype=CL:0000054!1.88e-16!2;CL:0000137!1.88e-16!2;CL:0000092!1.88e-16!2;CL:0000062!9.50e-12!11;CL:0000375!9.50e-12!11;CL:0000335!9.50e-12!11 | ||
|ontology_enrichment_celltype_v019=CL:0000062;1.02e-13;9!CL:0000322;9.90e-11;3!CL:0000333;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.07e-11,11;CL:0000375,2.07e-11,11;CL:0000335,2.07e-11,11;CL:0000322,1.20e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000335;2.07e-11;11 | |||
|ontology_enrichment_disease=DOID:200!1.88e-16!2;DOID:4305!1.88e-16!2;DOID:1036!2.46e-09!8;DOID:0060085!3.31e-09!1;DOID:3165!3.31e-09!1;DOID:0060121!3.31e-09!1;DOID:2438!3.31e-09!1;DOID:4418!3.31e-09!1;DOID:162!2.68e-08!235;DOID:14566!4.70e-08!239 | |ontology_enrichment_disease=DOID:200!1.88e-16!2;DOID:4305!1.88e-16!2;DOID:1036!2.46e-09!8;DOID:0060085!3.31e-09!1;DOID:3165!3.31e-09!1;DOID:0060121!3.31e-09!1;DOID:2438!3.31e-09!1;DOID:4418!3.31e-09!1;DOID:162!2.68e-08!235;DOID:14566!4.70e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:3910;2.05e-15;2!DOID:3908;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.74e-15,2;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007195!2.40e-09!1;UBERON:0001282!9.17e-09!1;UBERON:0009842!9.17e-09!1;UBERON:0003704!9.17e-09!1;UBERON:0001171!9.17e-09!1;UBERON:0001172!9.17e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.37e-29;1!UBERON:0004903;2.05e-15;2!UBERON:0002173;2.05e-15;2!UBERON:0002186;2.05e-15;2!UBERON:0001474;5.93e-15;18!UBERON:0004821;9.90e-11;3!UBERON:0007499;9.90e-11;3!UBERON:0003215;9.90e-11;3!UBERON:0010368;9.90e-11;3!UBERON:0009911;9.90e-11;3!UBERON:0002299;9.90e-11;3!UBERON:0006524;9.90e-11;3!UBERON:0008874;9.90e-11;3!UBERON:0002169;9.90e-11;3!UBERON:0004894;9.90e-11;3!UBERON:0004765;1.40e-10;26!UBERON:0009856;2.26e-08;4!UBERON:0001434;3.56e-07;36!UBERON:0000013;6.04e-07;5!UBERON:0002410;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,3.16e-29,1;UBERON:0004903,2.74e-15,2;UBERON:0002173,2.74e-15,2;UBERON:0002186,2.74e-15,2;UBERON:0004821,1.20e-10,3;UBERON:0003215,1.20e-10,3;UBERON:0010368,1.20e-10,3;UBERON:0009911,1.20e-10,3;UBERON:0002299,1.20e-10,3;UBERON:0006524,1.20e-10,3;UBERON:0008874,1.20e-10,3;UBERON:0002169,1.20e-10,3;UBERON:0004894,1.20e-10,3;UBERON:0000013,5.70e-07,5;UBERON:0002410,5.70e-07,5 | |||
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|short_description=p1@ENST00000555797 | |short_description=p1@ENST00000555797 | ||
}} | }} |
Latest revision as of 20:02, 24 July 2015
Short description: | p1@ENST00000555797 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000555797_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | -21bp_to_ENST00000555797_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.07e-11 | 11 |
osteoprogenitor cell | 2.07e-11 | 11 |
mesenchyme condensation cell | 2.07e-11 | 11 |
pneumocyte | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 3.16e-29 | 1 |
bronchoalveolar duct junction | 2.74e-15 | 2 |
alveolar duct | 2.74e-15 | 2 |
bronchiole | 2.74e-15 | 2 |
pulmonary alveolus epithelium | 1.20e-10 | 3 |
alveolus | 1.20e-10 | 3 |
pulmonary lobule | 1.20e-10 | 3 |
lobule | 1.20e-10 | 3 |
alveolus of lung | 1.20e-10 | 3 |
alveolar system | 1.20e-10 | 3 |
pulmonary acinus | 1.20e-10 | 3 |
alveolar sac | 1.20e-10 | 3 |
alveolar wall | 1.20e-10 | 3 |
sympathetic nervous system | 5.70e-07 | 5 |
autonomic nervous system | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.74e-15 | 2 |
non-small cell lung carcinoma | 6.77e-07 | 5 |