FFCP PHASE1:Hg19::chr14:22975382..22975400,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_uc001wfa.2_5end | |association_with_transcript=-11bp_to_uc001wfa.2_5end | ||
|cluster_id=chr14:22975382..22975400,+ | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_1_at_uc001wfa.2_5end | |description=CAGE_peak_1_at_uc001wfa.2_5end | ||
|id=chr14:22975382..22975400,+ | |id=chr14:22975382..22975400,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.83e-20!52;CL:0000542!5.31e-20!53;CL:0000051!5.31e-20!53;CL:0000791!5.98e-14!18;CL:0000789!5.98e-14!18;CL:0002420!5.98e-14!18;CL:0002419!5.98e-14!18;CL:0000790!5.98e-14!18;CL:0000945!9.25e-14!24;CL:0000826!9.25e-14!24;CL:0000080!2.93e-11!6;CL:0002087!8.70e-10!119;CL:0000084!1.09e-09!25;CL:0000827!1.09e-09!25;CL:0000738!1.08e-08!140;CL:0002031!3.32e-07!124;CL:0000988!3.44e-07!182;CL:0000624!6.83e-07!6 | |ontology_enrichment_celltype=CL:0000838!1.83e-20!52;CL:0000542!5.31e-20!53;CL:0000051!5.31e-20!53;CL:0000791!5.98e-14!18;CL:0000789!5.98e-14!18;CL:0002420!5.98e-14!18;CL:0002419!5.98e-14!18;CL:0000790!5.98e-14!18;CL:0000945!9.25e-14!24;CL:0000826!9.25e-14!24;CL:0000080!2.93e-11!6;CL:0002087!8.70e-10!119;CL:0000084!1.09e-09!25;CL:0000827!1.09e-09!25;CL:0000738!1.08e-08!140;CL:0002031!3.32e-07!124;CL:0000988!3.44e-07!182;CL:0000624!6.83e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.31e-25;24!CL:0000946;1.12e-17;1!CL:0000786;1.12e-17;1!CL:0000771;1.64e-09;2!CL:0000214;6.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.81e-25,24;CL:0000826,7.81e-25,24;CL:0000946,1.03e-17,1;CL:0000786,1.03e-17,1;CL:0000980,1.03e-17,1;CL:0000838,2.69e-15,52;CL:0000542,5.30e-15,53;CL:0000051,5.30e-15,53;CL:0000785,1.57e-09,2;CL:0000955,1.57e-09,2;CL:0000818,1.57e-09,2;CL:0000954,1.57e-09,2;CL:0000816,1.57e-09,2;CL:0000771,1.71e-09,2;CL:0000738,3.59e-07,136;CL:0000214,6.88e-07,3;CL:0000817,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.64e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.38e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:630;6.23e-18;1!DOID:0050177;6.23e-18;1!DOID:0050427;6.23e-18;1!DOID:0060058;1.40e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.23e-18,1;DOID:0050177,6.23e-18,1;DOID:0050427,6.23e-18,1;DOID:0060058,1.37e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.14e-10!4;UBERON:0005058!1.14e-10!4;UBERON:0009113!1.14e-10!4;UBERON:0003295!1.14e-10!4;UBERON:0005562!1.14e-10!4;UBERON:0004177!1.57e-10!7;UBERON:0003351!3.01e-07!6;UBERON:0001042!3.85e-07!10;UBERON:0009145!3.85e-07!10;UBERON:0000178!8.68e-07!15;UBERON:0000179!8.68e-07!15;UBERON:0000463!8.68e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;6.50e-07;3!UBERON:0007616;6.50e-07;3!UBERON:0002217;6.50e-07;3!UBERON:0002018;6.50e-07;3!UBERON:0002106;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,6.88e-07,3;UBERON:0007616,6.88e-07,3;UBERON:0002217,6.88e-07,3;UBERON:0002018,6.88e-07,3;UBERON:0002106,8.15e-07,3;UBERON:0004854,8.15e-07,3;UBERON:0009034,8.15e-07,3;UBERON:0002095,8.15e-07,3;UBERON:0004782,8.15e-07,3;UBERON:0003281,8.15e-07,3;UBERON:0009664,8.15e-07,3;UBERON:0002296,8.15e-07,3;UBERON:0005602,8.15e-07,3;UBERON:0001179,8.15e-07,3;UBERON:0006293,8.15e-07,3 | |||
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| ||
|short_description=p1@uc001wfa.2 | |short_description=p1@uc001wfa.2 | ||
}} | }} |
Latest revision as of 19:14, 24 July 2015
Short description: | p1@uc001wfa.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001wfa.2_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -11bp_to_uc001wfa.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.81e-25 | 24 |
pro-B cell | 7.81e-25 | 24 |
antibody secreting cell | 1.03e-17 | 1 |
plasma cell | 1.03e-17 | 1 |
plasmablast | 1.03e-17 | 1 |
lymphoid lineage restricted progenitor cell | 2.69e-15 | 52 |
lymphocyte | 5.30e-15 | 53 |
common lymphoid progenitor | 5.30e-15 | 53 |
mature B cell | 1.57e-09 | 2 |
pre-B-II cell | 1.57e-09 | 2 |
transitional stage B cell | 1.57e-09 | 2 |
small pre-B-II cell | 1.57e-09 | 2 |
immature B cell | 1.57e-09 | 2 |
eosinophil | 1.71e-09 | 2 |
leukocyte | 3.59e-07 | 136 |
synovial cell | 6.88e-07 | 3 |
precursor B cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 6.88e-07 | 3 |
layer of synovial tissue | 6.88e-07 | 3 |
synovial joint | 6.88e-07 | 3 |
synovial membrane of synovial joint | 6.88e-07 | 3 |
spleen | 8.15e-07 | 3 |
gastrointestinal system mesentery | 8.15e-07 | 3 |
stomach region | 8.15e-07 | 3 |
mesentery | 8.15e-07 | 3 |
gastrointestinal system serosa | 8.15e-07 | 3 |
mesentery of stomach | 8.15e-07 | 3 |
gut mesentery | 8.15e-07 | 3 |
dorsal mesentery | 8.15e-07 | 3 |
dorsal mesogastrium | 8.15e-07 | 3 |
peritoneal cavity | 8.15e-07 | 3 |
spleen primordium | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.23e-18 | 1 |
monogenic disease | 6.23e-18 | 1 |
xeroderma pigmentosum | 6.23e-18 | 1 |
lymphoma | 1.37e-07 | 10 |