FFCP PHASE1:Hg19::chr14:21731417..21731450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:21731417..21731450,- | |||
|coexpression_cluster_id=C621 | |||
|description=CAGE_peak_at_chr14:21731417..21731450,- | |description=CAGE_peak_at_chr14:21731417..21731450,- | ||
|id=chr14:21731417..21731450,- | |id=chr14:21731417..21731450,- | ||
|ontology_enrichment_celltype=CL:0000738!4.06e-23!140;CL:0000037!3.01e-19!172;CL:0000566!3.01e-19!172;CL:0002087!1.34e-18!119;CL:0000988!2.24e-18!182;CL:0002032!5.65e-18!165;CL:0000837!5.65e-18!165;CL:0002031!3.30e-17!124;CL:0000766!1.63e-16!76;CL:0002057!1.13e-14!42;CL:0000860!3.66e-13!45;CL:0002194!6.60e-13!63;CL:0000576!6.60e-13!63;CL:0000040!6.60e-13!63;CL:0000559!6.60e-13!63;CL:0000557!7.26e-13!71;CL:0002009!1.62e-12!65;CL:0000839!2.12e-12!70;CL:0000763!2.47e-12!112;CL:0000049!2.47e-12!112 | |ontology_enrichment_celltype=CL:0000738!4.06e-23!140;CL:0000037!3.01e-19!172;CL:0000566!3.01e-19!172;CL:0002087!1.34e-18!119;CL:0000988!2.24e-18!182;CL:0002032!5.65e-18!165;CL:0000837!5.65e-18!165;CL:0002031!3.30e-17!124;CL:0000766!1.63e-16!76;CL:0002057!1.13e-14!42;CL:0000860!3.66e-13!45;CL:0002194!6.60e-13!63;CL:0000576!6.60e-13!63;CL:0000040!6.60e-13!63;CL:0000559!6.60e-13!63;CL:0000557!7.26e-13!71;CL:0002009!1.62e-12!65;CL:0000839!2.12e-12!70;CL:0000763!2.47e-12!112;CL:0000049!2.47e-12!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.99e-32;33!CL:0002057;7.99e-32;33!CL:0000473;1.10e-23;39!CL:0000234;1.10e-23;39!CL:0000576;1.09e-20;48!CL:0000766;9.60e-13;69!CL:0002087;6.75e-12;104!CL:0000623;1.00e-08;3!CL:0000738;7.85e-08;136!CL:0000763;9.11e-08;100!CL:0000771;9.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-35,42;CL:0002057,1.65e-35,42;CL:0000473,7.97e-33,48;CL:0000234,7.97e-33,48;CL:0002087,4.48e-32,115;CL:0000738,6.05e-32,136;CL:0000766,1.56e-28,72;CL:0002031,5.09e-27,120;CL:0002194,1.09e-26,59;CL:0000576,1.09e-26,59;CL:0000040,1.09e-26,59;CL:0000559,1.09e-26,59;CL:0000037,4.29e-26,168;CL:0002009,1.43e-25,61;CL:0000988,1.79e-25,177;CL:0002032,4.91e-25,161;CL:0000837,4.91e-25,161;CL:0000557,1.77e-24,67;CL:0000839,4.44e-23,66;CL:0000763,8.68e-19,108;CL:0000049,8.68e-19,108;CL:0000623,1.04e-08,3;CL:0000825,1.04e-08,3;CL:0000134,1.19e-08,354;CL:0002320,3.05e-08,361;CL:0000219,7.93e-08,386;CL:0000771,8.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.75e-10!80;UBERON:0001474!1.62e-09!86;UBERON:0002390!4.02e-09!102;UBERON:0003061!4.02e-09!102;UBERON:0002193!2.24e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!2.75e-10!80;UBERON:0001474!1.62e-09!86;UBERON:0002390!4.02e-09!102;UBERON:0003061!4.02e-09!102;UBERON:0002193!2.24e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.12e-20,76;UBERON:0001474,1.30e-18,82;UBERON:0002390,2.43e-18,98;UBERON:0003061,2.43e-18,98;UBERON:0004765,2.73e-16,90;UBERON:0002193,7.07e-16,108;UBERON:0002405,1.59e-15,93;UBERON:0001434,6.38e-14,100;UBERON:0002384,9.54e-09,371 | |||
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| ||
|short_description=p@chr14:21731417..21731450,- | |short_description=p@chr14:21731417..21731450,- | ||
}} | }} |
Latest revision as of 19:00, 24 July 2015
Short description: | p@chr14:21731417..21731450, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:21731417..21731450, - |
Coexpression cluster: | C621_Neutrophils_CD14_CD4_CD8_Natural_CD19_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-35 | 42 |
defensive cell | 7.97e-33 | 48 |
phagocyte | 7.97e-33 | 48 |
nongranular leukocyte | 4.48e-32 | 115 |
leukocyte | 6.05e-32 | 136 |
myeloid leukocyte | 1.56e-28 | 72 |
hematopoietic lineage restricted progenitor cell | 5.09e-27 | 120 |
monopoietic cell | 1.09e-26 | 59 |
monocyte | 1.09e-26 | 59 |
monoblast | 1.09e-26 | 59 |
promonocyte | 1.09e-26 | 59 |
hematopoietic stem cell | 4.29e-26 | 168 |
macrophage dendritic cell progenitor | 1.43e-25 | 61 |
hematopoietic cell | 1.79e-25 | 177 |
hematopoietic oligopotent progenitor cell | 4.91e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.91e-25 | 161 |
granulocyte monocyte progenitor cell | 1.77e-24 | 67 |
myeloid lineage restricted progenitor cell | 4.44e-23 | 66 |
myeloid cell | 8.68e-19 | 108 |
common myeloid progenitor | 8.68e-19 | 108 |
natural killer cell | 1.04e-08 | 3 |
pro-NK cell | 1.04e-08 | 3 |
mesenchymal cell | 1.19e-08 | 354 |
connective tissue cell | 3.05e-08 | 361 |
motile cell | 7.93e-08 | 386 |
eosinophil | 8.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.12e-20 | 76 |
bone element | 1.30e-18 | 82 |
hematopoietic system | 2.43e-18 | 98 |
blood island | 2.43e-18 | 98 |
skeletal element | 2.73e-16 | 90 |
hemolymphoid system | 7.07e-16 | 108 |
immune system | 1.59e-15 | 93 |
skeletal system | 6.38e-14 | 100 |
connective tissue | 9.54e-09 | 371 |