FFCP PHASE1:Hg19::chr14:107253188..107253199,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:107253188..107253199,+
|short_description=p@chr14:107253188..107253199,+
|description=CAGE_peak_at_chr14:107253188..107253199,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:107253188..107253199,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_at_chr14:107253188..107253199,+ | |||
|id=chr14:107253188..107253199,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.99e-36!140;CL:0000037!1.20e-31!172;CL:0000566!1.20e-31!172;CL:0000988!1.87e-29!182;CL:0002087!6.89e-23!119;CL:0002032!3.41e-22!165;CL:0000837!3.41e-22!165;CL:0002031!4.41e-20!124;CL:0000451!1.04e-19!10;CL:0000784!6.27e-15!3;CL:0000453!9.86e-15!5;CL:0000623!4.12e-14!3;CL:0000825!4.12e-14!3;CL:0000842!1.18e-13!3;CL:0000838!7.84e-13!52;CL:0000542!1.56e-12!53;CL:0000051!1.56e-12!53;CL:0000990!1.58e-12!8;CL:0002393!1.46e-11!9;CL:0002397!1.46e-11!9;CL:0000134!7.97e-11!358;CL:0000763!1.55e-10!112;CL:0000049!1.55e-10!112;CL:0002320!1.87e-10!365;CL:0000224!2.32e-10!4;CL:0001014!2.42e-10!2;CL:0001016!2.42e-10!2;CL:0002057!7.44e-10!42;CL:0002009!1.31e-09!65;CL:0000034!2.64e-09!444;CL:0000766!3.74e-09!76;CL:0000219!3.80e-09!390;CL:0000860!4.66e-09!45;CL:0000557!1.46e-08!71;CL:0000048!1.38e-07!430;CL:0000840!1.42e-07!5;CL:0001029!1.42e-07!5;CL:0000723!2.30e-07!436;CL:0000080!4.80e-07!6;CL:0002194!4.87e-07!63;CL:0000576!4.87e-07!63;CL:0000040!4.87e-07!63;CL:0000559!4.87e-07!63;CL:0000767!5.03e-07!3;CL:0000624!7.42e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.88e-55;3!CL:0000451;3.03e-41;10!CL:0001014;8.19e-37;2!CL:0001016;8.19e-37;2!CL:0000840;9.33e-28;5!CL:0000037;2.25e-19;1!CL:0001024;2.25e-19;1!CL:0000990;9.21e-19;8!CL:0000453;2.17e-15;5!CL:0000771;2.99e-10;2!CL:0000094;6.94e-10;8!CL:0000081;1.96e-07;11!CL:0000767;2.97e-07;3!CL:0000623;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.88e-55,3;CL:0000451,3.29e-41,10;CL:0001014,9.84e-37,2;CL:0001016,9.84e-37,2;CL:0000840,1.02e-27,5;CL:0001029,1.02e-27,5;CL:0001024,2.25e-19,1;CL:0000990,9.79e-19,8;CL:0000453,2.34e-15,5;CL:0000771,2.49e-10,2;CL:0000094,6.06e-10,8;CL:0000037,4.65e-08,168;CL:0000738,5.92e-08,136;CL:0000988,1.29e-07,177;CL:0000081,1.78e-07,11;CL:0000767,2.79e-07,3;CL:0000623,3.35e-07,3;CL:0000825,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.01e-10!375;UBERON:0002390!2.45e-09!102;UBERON:0003061!2.45e-09!102;UBERON:0002371!1.41e-08!80;UBERON:0002193!3.65e-08!112;UBERON:0001474!9.07e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.77408061658038,0,0,0,0.0774672005803016,0.142169232487422,2.05520307534393,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.336985893439485,0.150176892841506,0,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,3.96513985737078,0.560508562981536,1.05353633910031,0.196709770113833,0,0.205601498999509,0,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76981248610684,3.43196946468077,8.54352253057999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.77408061658038,0,0,0,0.0774672005803016,0.142169232487422,2.05520307534393,0,0,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0.425208599930087,0.209658645508376,0.336985893439485,0.150176892841506,0,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,3.96513985737078,0.560508562981536,1.05353633910031,0.196709770113833,0,0.205601498999509,0,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76981248610684,3.43196946468077,8.54352253057999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:107253188..107253199,+ | |||
}} | }} |
Latest revision as of 18:47, 24 July 2015
Short description: | p@chr14:107253188..107253199, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:107253188..107253199, + |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.88e-55 | 3 |
dendritic cell | 3.29e-41 | 10 |
CD1a-positive Langerhans cell | 9.84e-37 | 2 |
immature CD1a-positive Langerhans cell | 9.84e-37 | 2 |
immature conventional dendritic cell | 1.02e-27 | 5 |
common dendritic progenitor | 1.02e-27 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.25e-19 | 1 |
conventional dendritic cell | 9.79e-19 | 8 |
Langerhans cell | 2.34e-15 | 5 |
eosinophil | 2.49e-10 | 2 |
granulocyte | 6.06e-10 | 8 |
hematopoietic stem cell | 4.65e-08 | 168 |
leukocyte | 5.92e-08 | 136 |
hematopoietic cell | 1.29e-07 | 177 |
blood cell | 1.78e-07 | 11 |
basophil | 2.79e-07 | 3 |
natural killer cell | 3.35e-07 | 3 |
pro-NK cell | 3.35e-07 | 3 |